Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_01500
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Entry
PFREUD_01500 CDS
T01252
Name
(GenBank) Cell envelope-related transcriptional attenuator
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
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Gene cluster
GFIT
Motif
Pfam:
LytR_cpsA_psr
DUF3112
Motif
Other DBs
NCBI-ProteinID:
CBL55667
UniProt:
D7GHU5
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Position
complement(189479..192067)
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AA seq
862 aa
AA seq
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MADDDVQRPRRVRRAADDAHSATPPASGTPGTPRRIWARPQPEDPPTTPPAAPEAPAAPS
TPADPTPTGGSSRRGMGTNEPHVSKWGTRESTPEPTASATPRRSWSRRRAESTGDQPPVG
SGHPTGEGTGPRHARRSAPIHKPVESDLSHPDAPRSTAAADATTPSPAPAEQAPTRPAPP
AAATPRGRQHDAPTPRASAPDKHVASRRTPATTPPAAATPHSAAPHSPAPHDPTPPSPTT
HAPTPGTPTAPRSERGANLTLGGEPLGEHTAFLHAPDYRHANAAARAAARERARRAAAGT
EPAAHDGELFDVEQVGLREPPPPPPEPEPASLRSRFAAFTERSDDTGSHGFGWTMLRTTL
GSLIPGAGLIGTRLTMIGTLLFMMTVVFGSGVILAAVVHPPALMATVMNSVGLTAIGIML
VAVTIIWMAIVAGTYLVTRPRRMKRWQRIAGAIVVFLMAALVGSVSSVGAAYAFESAIVV
SDVFGNSKTRSQTRPLGDWANKDRVNILLLGGDSGADRDEDLGLRTDTVMLASINTHTGN
TVFIQLPRNLENVPFPAGSDLAKVYPNGRVWDRSSGTEDNYMLNAVWNEVPLEHPELFRN
TDQPGADATKLAVSGITGLTVDYYAMINIDGIQALVDAMGGVVVNINFPIAKGGHVDGYG
DEECGVDGNLSVGPDQKLDGADAMWYARSRCNDPDYDYGRMRRQSCLVNAIIRQANPQTM
LTRYEAIAAAGKNMMSTDIPESLLDDATNLALQVKDAQVSRVVFSQAIGTAPQVGDINPG
NPDYNAIRNRISGAITASDNGTTPSAPASASSSPMATGSAGSASSVASAAGSGSTSASAA
GAAATPSGTAENMSGACDYHPN
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacgacgttcagcgaccccgcagggtccggcgcgccgccgacgatgcacac
tccgccacgccccccgcgtccggcaccccgggcacgccgcggcgcatctgggcccgcccg
cagcccgaggacccgccgaccacccctccggcagcccccgaagcgccggcagccccttcc
acaccggcagatcccacgcccaccggcggctcctcgcggcgcggcatgggcacgaacgaa
ccccacgtcagcaagtggggcacccgcgagtcgacgccggagcccacggcgagcgccaca
ccgcgccgctcctggtcgcgtcgacgcgccgagtccacgggagaccagcccccggtcgga
tcgggccatcccaccggcgagggcacgggtccgcgccacgcacgccgctccgcgccgatc
cacaagccggtcgaaagcgacctctcccaccccgatgccccccgcagcaccgccgccgca
gatgcgacgacgccatcccccgccccggccgagcaggcacccacgcgtccggcaccgcca
gccgccgcgacaccccggggacgccaacacgacgccccgaccccacgtgcgtccgcaccc
gacaagcacgtagcctcccggcgcacgcccgcgaccacgcccccggccgcagccacgccg
cacagtgccgcaccccacagcccagcaccccatgacccgacgccccccagcccgacgacc
cacgcccccacacccggcacaccgaccgcgccccgctccgagcggggcgccaacctcacg
ctgggcggtgagccgctcggcgagcacaccgccttcctgcatgcccccgactaccggcat
gccaacgccgccgcccgggccgcggccagggagcgcgcccgacgcgccgcagccggcacc
gaacctgccgcacacgacggcgaactgttcgacgtcgagcaggtggggctgcgcgaaccg
ccaccgccaccgcccgaacccgaaccggcctcgctgcgcagtcgcttcgccgcgttcacc
gagcgcagcgacgacaccggctcgcacggctttggctggacgatgctgcgcaccacactc
ggctccctgatccccggcgccggcctgatcggcacccgcctcacgatgatcggcacgctg
ctgttcatgatgacggtggtcttcggctccggcgtgatcctggccgccgtggtgcacccg
cccgcgctgatggccaccgtgatgaactcagtgggcctgaccgccatcggcatcatgttg
gtggccgtcacgatcatctggatggccatcgtcgccggcacctacctggtgacccggccg
cggcgcatgaagcgctggcaacgcatcgcgggcgccatcgtcgtcttcctgatggccgcc
ctggtgggctcggtgagttcggtgggcgccgcctacgcgttcgaatcggcgatcgtcgtc
agcgacgtcttcggcaactccaagacccgctcgcagacgcgtccgctcggcgactgggcc
aacaaggaccgggtgaacatcctgttgctggggggcgactcgggcgcggaccgcgacgag
gacctcggcctgcgcaccgacacggtgatgctcgcgtcgatcaacacccacaccggaaat
acggtgttcatccagctgccccgcaacctcgagaacgtgcccttccccgccggcagcgac
ctggcgaaggtctaccccaatggacgcgtctgggaccggtcgtcgggcaccgaggacaac
tacatgctcaacgcggtgtggaatgaggtgccgctggagcatccggagctgttcaggaac
accgatcagcccggcgccgacgccacgaagctggccgtcagcggcatcaccgggctcacc
gtcgactactacgcgatgatcaacatcgacggcatccaggcgctggtcgacgccatgggc
ggcgtggtggtcaacatcaacttcccgatcgccaagggtggccatgtcgacggatacggc
gacgaggagtgtggcgtcgacggcaacctgtcggtggggcccgaccagaagctcgatggc
gccgatgccatgtggtacgcccgcagccgctgcaacgaccccgactacgactacgggcgc
atgcgccggcagagctgcctggtgaatgcgatcatccggcaggccaatccgcagaccatg
ctcacccgctatgaggcgatcgcggccgccggcaagaacatgatgagcaccgacatcccc
gagagcctgctcgacgacgccaccaacctggccctgcaggtgaaggacgcccaggtgagc
cgcgtggtgttctcgcaggccatcggcaccgccccgcaggtcggtgacatcaatccgggc
aaccccgactacaacgcgatccggaaccgcatctccggtgccatcaccgccagcgacaat
ggcaccacgccgtcggcgccggcatcggcgtccagctcaccgatggccacgggcagtgcg
ggatcggcgagcagcgtcgcatcagcggccggcagcgggtcgacgagtgccagcgcggcc
ggtgcggcagcaaccccgtccggcaccgcagagaacatgagcggtgcctgcgactaccac
ccgaactga
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