Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_09540
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Entry
PFREUD_09540 CDS
T01252
Symbol
gabT
Name
(GenBank) 4-aminobutyrate aminotransferase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Pathway
pfr00250
Alanine, aspartate and glutamate metabolism
pfr00280
Valine, leucine and isoleucine degradation
pfr00310
Lysine degradation
pfr00410
beta-Alanine metabolism
pfr00640
Propanoate metabolism
pfr00650
Butanoate metabolism
pfr01100
Metabolic pathways
pfr01120
Microbial metabolism in diverse environments
Module
pfr_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PFREUD_09540 (gabT)
00650 Butanoate metabolism
PFREUD_09540 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PFREUD_09540 (gabT)
00280 Valine, leucine and isoleucine degradation
PFREUD_09540 (gabT)
00310 Lysine degradation
PFREUD_09540 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PFREUD_09540 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfr01007
]
PFREUD_09540 (gabT)
Enzymes [BR:
pfr01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
PFREUD_09540 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
PFREUD_09540 (gabT)
2.6.1.48 5-aminovalerate transaminase
PFREUD_09540 (gabT)
Amino acid related enzymes [BR:
pfr01007
]
Aminotransferase (transaminase)
Class III
PFREUD_09540 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
CBL56480
UniProt:
D7GD69
LinkDB
All DBs
Position
complement(1074294..1075631)
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AA seq
445 aa
AA seq
DB search
MSDPVYHLPQERKLVTSLPGPSSRKIEARRDAVVAKGVSSSAPFYVDKADGGVIVDADGN
SIIDLGAGIAVTSVGASAPRVVENVQKAVANFTHSSFATTPYEGYVAVCEQLAELTPGSF
AKKTVLVNSGAEAVENAVKVARHYTGRDAVAVAENAFHGRTNLTMAMTSKAMPYKTGFGP
FAPEIYHFPASYPFQEPTPLTGEQAAQRAIDYLETRVGADHLACLVHEPIQGEGGFIVPE
PGYLPALQAWCRAHGIVFVIDEIQSGFCRSGKWFASEYEGLEPDVITTAKALGGGLPIAA
CTGRADIMDSAQAGGLGGTYGGNPISCAASLGAIATMKEWDLPNRAQAIETEIRAKLGDL
VNDPASCVGELRGHGAMMALEFVAPGTRTPDAAKAKQVVSDLLSEGVLMLTCGINGNCVR
FLPSLVIPIPLLDEALDLLVKAIKA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcccgtctatcacctgccccaggagcgcaagctcgtcacctcgttgcccggg
ccgagttcacgcaagatcgaagcgaggcgcgacgccgtggtggccaagggcgtctcctcc
tcggccccgttctatgtggacaaggccgatggcggcgtcatcgttgacgccgatggcaac
tccatcattgacctgggtgccggaatcgccgtcaccagcgtgggcgcctcggctcccagg
gtcgtggaaaatgtccagaaggccgtggcgaacttcacccactcgagcttcgccaccacc
ccctacgagggttacgtggcagtctgtgagcagcttgccgaactgacccccggttccttc
gccaagaagaccgtcctggtcaattccggcgccgaggccgtggagaacgcggtgaaggtg
gcccgccactacaccggacgcgacgccgtggcagtggccgagaacgccttccacggccgc
accaacctcacgatggccatgacctccaaggccatgccctacaagaccggattcggcccc
ttcgccccggagatctaccacttccccgcgagctatcccttccaggagcccacgccgctg
accggcgagcaggccgcccagcgtgccatcgactacctcgagacgcgggtgggcgccgac
cacctcgcatgcctggtgcacgagcccatccagggcgagggcggcttcatcgtgcccgaa
cccggctaccttcctgccctgcaggcctggtgccgcgcccatggcatcgtcttcgtcatc
gacgagatccagtcgggcttctgccgctccggaaagtggttcgccagcgagtacgagggc
ctggaaccggatgtgatcaccaccgccaaggcactcggcggcggccttccgattgcggcc
tgcaccggacgcgccgacatcatggactccgcacaggccggcggcctgggcggcacctac
ggcggcaacccgatttcatgtgccgccagcctcggtgccatcgccaccatgaaggaatgg
gaccttcccaaccgtgcgcaggccatcgagaccgagatccgggccaagctcggcgatctg
gtgaacgaccccgcctcctgtgtcggcgagctgcgcggccacggcgccatgatggcactt
gagttcgtggcacccggcacccgcacccccgacgccgccaaggcgaagcaggtggtcagt
gacctgctctctgagggcgtgctcatgctcacctgcggcatcaacggcaactgcgtgcgc
ttcctgccgtcactggtgatcccgatcccgttgctcgacgaggcactcgacctgctggtg
aaggccatcaaggcctga
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