Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1: PFREUD_20150
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Entry
PFREUD_20150 CDS
T01252
Symbol
sms
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
pfr
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Brite
KEGG Orthology (KO) [BR:
pfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfr03400
]
PFREUD_20150 (sms)
DNA repair and recombination proteins [BR:
pfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PFREUD_20150 (sms)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Rubredoxin_2
ChlI
DnaB_C
AAA_16
Lon_C
AAA_22
AAA
AAA_30
NACHT
nSTAND3
AAA_24
AAA_5
MCM
MeaB
NTPase_1
AAA_14
ATPase_2
ABC_tran
AAA_19
IstB_IS21
RsgA_GTPase
SLFN-g3_helicase
CbiA
AAA_29
DZR
ArsA_ATPase
Ribosomal_L37ae
Motif
Other DBs
NCBI-ProteinID:
CBL57508
UniProt:
D7GG47
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All DBs
Position
2172218..2173612
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AA seq
464 aa
AA seq
DB search
MAKKQQDSYQCTECGWTGVRWVGRCPQCQAWGSVVERGASVSTSTAVRTSAPTTRALPIA
QVSAQASDRHLTGIGELDRVLGGGLVPGVVVLLAGEPGVGKSTLLLEVAAQWARAGHRTL
YVTGEESASQVRLRATRTDALADELYLAAENDLGTVLGHVEEVEPSLMVLDSIQTVSAGS
GDGVSGGVAQVREVTTALVRVAKARGMAVIIVGHVTKDGGIAGPRTLEHLVDVVLNFEGD
RHSGFRMVRATKNRYGPADEVGCFEMGEGGIVEVPDPSGLFTTRHDEPVPGTCVTVTMEG
RRPLLAEVQGLVAPVPNETPARRVTNGVDFSRVAMILAVLQRKARLPMSRRDVYVSTVGG
ARITDPSADLAVAVAVASASLNRNFPRRVLAMGEVGLAGDLRRVPALERRVAEADRLGFE
LAIVPTNSRDNSRGAPKLHNLKVVEVPSVADALGVLDLRRAERR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagaaacagcaagactcctatcagtgcaccgaatgcggttggaccggcgtgcgc
tgggtcgggcgctgcccgcagtgccaggcctggggctcggtggtggagcgcggcgcctcg
gtgtcgaccagcacggccgtgcggacgtcggcacccaccacgcgcgccctgccgatcgcc
caggtgtcggcgcaggcctccgatcgccatctcaccgggatcggtgagctcgaccgcgtg
ctcggtggcggcctggtgcccggcgtcgtcgtgttgttggcgggcgagccgggcgtcggc
aagtcgaccctgctgctcgaggtggcggcgcaatgggcgcgggccgggcaccgcacgctg
tatgtcaccggtgaggaatcggcctcgcaggtgaggttgcgggccacccgcaccgacgcg
ctggccgatgagctctacctggccgccgagaacgacctgggcaccgtgctgggccacgtc
gaggaggtggagccgagcctgatggtgctcgactcgatccagaccgtcagcgccggcagc
ggcgatggcgtcagcgggggcgtcgcacaggtgcgcgaggtgaccacggccctggtgcgg
gtggccaaggcccgcgggatggccgtgatcatcgtgggccatgtgaccaaggacggcggc
atcgccggcccgcgcacactggagcacctggtggacgtggtgctcaacttcgagggcgac
cggcattccggcttccgcatggtgcgtgccacgaagaaccgctacggcccggccgacgag
gtgggctgcttcgagatgggtgagggcggcatcgtcgaggtgcccgatccatccgggctg
ttcaccacccgccacgacgagccggtgcccggcacctgcgtgaccgtcaccatggagggc
cgccggccgctgctggccgaggtgcagggcctggtggccccggtgcccaatgagacgccg
gcacggcgcgtcaccaacggcgtcgacttctcacgcgtggcgatgatcctggccgtgctg
caacgcaaggcacgcctgccgatgagccgccgcgatgtctatgtgagcacggtcgggggc
gcccgcatcaccgacccgagcgccgacctggccgtggcggtcgccgtcgcctcggcctca
ctcaaccggaacttcccacgacgggtgctggcgatgggcgaggtggggctggccggcgac
ctgcgtcgcgtgcccgccctggaacgccgcgtcgccgaggccgaccggttgggcttcgag
ctggccatcgtgcccaccaactcgcgcgacaacagccgcggcgcgcccaagctgcacaac
ctgaaggtggtggaggtgcccagcgtggccgacgcgctgggcgtgctcgacctgcgccgc
gcagagcggcgctga
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