Pseudomonas fluorescens SBW25: PFLU_5440
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Entry
PFLU_5440 CDS
T00899
Name
(GenBank) Putative regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfs
Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfs03000
]
PFLU_5440
Transcription factors [BR:
pfs03000
]
Prokaryotic type
Helix-turn-helix
Other families
PFLU_5440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_23
PAS_4
PAS_9
AAA_2
HTH_30
LZ_Tnp_IS481
IclR
HTH_7
PAS_8
PAS
HTH_50
HTH_17
HTH_22
HTH_AraC
AAA
RWP-RK
HTH_28
Mga
Enkurin
PAS_7
Motif
Other DBs
NCBI-ProteinID:
CAI2799582
UniProt:
C3K2P2
LinkDB
All DBs
Position
1:complement(5971535..5973442)
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AA seq
635 aa
AA seq
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MHNDHFSRHAQQVLTVAHGRDPSSDPSIARSWLRCLEDYHLDPAQTIAPTVLEHGRLLES
RERLQQVLHIAGSEMNSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGLWLGA
DWSEACEGTNGIGTCLVERQSLTIHRDEHFRGRHTGLTCSASPVFDPHGDLLAVLDVSSA
REAVSRQSQFHTMALVNLSAKMIESCYFLRHFEHHWLLRFHLQAESVGLFSEGLLAFDGN
GRICAVNQSALNLLGQLRGGLLGQPVEAFFECSLDQLLGRASANATASWPLRTRDGRPLF
AALRGQARSVPAPVARPAVVERPRLPGICLGDPALQRDFSKALRVFERDVPLLINGETGS
GKEAFAKAVHQASQRADKAFVALNCAAIPESLIESELFGYRGGSFTGARKEGMQGKLQQA
DGGTLFLDEIGDMPLALQTRLLRVLEDRLVVPLGGEPQAVNVRIISATHRNLLERVQDGS
FREDLYYRLNGLEVGLPALRERSDKSQLLDFLLAQEANGEAVALDPAARMALLAFAWPGN
VRQLRTVLRTLVALCDEGRVALEDLPAQIRQARPVAAAQARPAESPLEDAERLALLTALQ
QQRWHMTHTAEQLGVSRNTLYRKLRRHGIARHALS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgatcatttcagtcgccatgcccagcaggtgctcactgtggcgcatggccgc
gacccgtccagcgacccctccatcgcccgttcctggctgcgttgcctggaggattaccac
ctcgaccctgcgcaaaccattgcccccaccgtgcttgaacacggccgcctgctggaaagc
cgcgagcgtctgcaacaggtgctgcacatcgccggcagcgagatgaacagcctgcatcag
cagctctcgggcgcggggcacgccgtgctgctcacggatgcgcggggcgtgatcctcaac
tgtgtcactgcgccgtccgagcgtaagattttcgagcgcgccgggctgtggctgggggcg
gattggagcgaagcctgcgaaggcaccaatggcatcggcacctgcctggtggagcgccaa
tccctgaccatccatcgcgatgagcactttcgtggccggcataccgggctgacgtgttcg
gcgagcccggtgttcgatccccacggtgacctgctggccgtgctggatgtgtcttcggcg
cgcgaagccgtgtcgcgccagagccagtttcacaccatggcgttggtgaacctgtcggcg
aagatgatcgagagttgctacttcctgcgtcactttgaacaccactggttgctgcgtttt
catctgcaggcggagtcggtgggcctgttcagcgaagggctgctggcgtttgatggcaac
gggcgcatttgtgccgtcaaccagagcgcgctgaacctgttggggcagctgcgtggcggc
ttgttggggcagccggtggaggcgtttttcgaatgctccctggaccagttgctcggacgc
gccagtgccaatgccacggccagttggccgctgcgtacccgtgatggccggccgctgttc
gcggcgctgcggggccaggcgcgcagcgttcccgcgccggtcgcccggcctgccgtggtg
gagcggccgcgcctgcccggcatctgcctgggcgatccggcgctgcaacgggacttcagc
aaggcgctgcgggtattcgagcgcgatgtgccgttgctgatcaatggcgaaaccggctcc
ggtaaagaggccttcgccaaggcggtgcaccaggccagccagcgtgccgacaaggcattc
gtggcgctcaactgcgccgccatcccggaaagcctgatcgaaagcgaactgttcggctat
cgcggcggcagctttaccggtgcgcgcaaagagggcatgcaaggcaagttgcagcaggcc
gatggcggcaccctgttcctcgatgaaatcggcgatatgcccctggcgctgcaaacccgt
ctattaagggtgctggaggatcggctggtggtcccgctcggcggtgagccccaggctgtg
aacgtgcgaattatcagcgcaacccaccggaatttgctggagcgtgtgcaggacggcagc
ttccgcgaggacttgtattaccggctcaatggcctggaagtcgggttgcccgctttgcgc
gagcgcagtgataaatcccagttgctggacttcctgctggcgcaggaggccaatggcgaa
gcggtggcgctcgacccggcggcgcgtatggcgctgttggcatttgcctggccgggtaac
gtgcgccagttgcgcactgtgctgcgtacgctggtggcgctgtgtgatgaagggcgcgta
gcgcttgaggacttgcccgcgcagattcgccaggcccgcccggtggccgccgcgcaggcc
aggcccgcagagtcgccgctggaagacgcggagcgcctggcattgctcaccgctttgcag
caacagcgctggcacatgacgcacacggcggagcagttgggcgtcagccgcaacacgctg
tatagaaagctgcgcaggcacggtatcgcacgccacgccctcagctaa
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