KEGG   Pelosinus fermentans: JBW_01941Help
Entry
JBW_01941         CDS       T03813                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pft  Pelosinus fermentans
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pft00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    JBW_01941
Enzymes [BR:pft01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     JBW_01941
DNA repair and recombination proteins [BR:pft03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     JBW_01941
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(2246337..2247266)
Genome map
AA seq 309 aa AA seqDB search
MPNQTVMEINKLNVALSNLDKVFYTASNFTKAQVIDYYIRIAPVLLPHLTGRPLTLKRYP
NGATAKFFYQKECPSFRPNWLSTVPVWSESKKRSINFCLAQDLPSLIWAVNLAAIELHTS
LSRSEDILRPTMLVFDLDPGHPATIVHCAEVALTLHRILLESNLKSFPKTSGSKGIQVYI
PLNTRTITYTQTKEFAHTLAKILEQQNPSLVVSKMKKDLRKGKIFIDWSQNDDHKTTVCV
YSLRAKKYPTVSTPVTWEEVEAAYLQQAPDLLSFTTDQVLERVQTMGDLFAPVLELQQTL
PNLKIKKMV
NT seq 930 nt NT seq  +upstreamnt  +downstreamnt
atgcctaatcagactgtcatggaaattaacaaactgaatgtagcgctttccaacttagac
aaagttttttatactgccagtaattttacaaaggcacaagtaattgactactatatccgt
attgcacctgttttacttccccaccttacaggtcgcccacttactcttaagcgttaccct
aatggtgcaacagcaaagtttttttatcaaaaagaatgcccatccttccgccccaattgg
ttatcaaccgtaccggtgtggagtgaaagcaagaaacgcagcatcaatttttgtctcgcc
caagatctgccatcactgatctgggctgtcaatttagctgccattgaacttcatacttcc
ttatcacgctctgaagatatactccgacctaccatgttagtctttgacctcgatcctggt
cacccagcaacaattgtacattgcgctgaggtagctcttacactacatagaattttatta
gagagcaaccttaaaagctttcctaaaacatctggttcaaaaggcatccaagtctatata
cctcttaatacacggacgataacctatacccaaactaaagaatttgcccatacactcgca
aaaatattagaacaacagaatccttcccttgtcgtatctaaaatgaaaaaagatttacgc
aaaggaaaaatttttatagactggagccaaaatgacgatcataaaacgacggtttgtgtc
tattctctacgagcaaaaaagtaccctaccgtatctactccagtgacttgggaagaagta
gaagcagcgtatctacaacaagctcctgatctactctctttcactaccgatcaagtatta
gaaagagttcagacaatgggggacttgtttgcacctgttcttgagcttcagcagacacta
ccgaacctcaagatcaagaaaatggtctga

DBGET integrated database retrieval system