Pestalotiopsis fici: PFICI_05483
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Entry
PFICI_05483 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PFICI_05483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_05483
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
PFICI_05483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
19270496
NCBI-ProteinID:
XP_007832255
UniProt:
W3XDV4
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MPPHLPRKRLRTPSPEGGNGAKKAGKSSKSSTPNGVVPPRKSTVFEDLNTSDKKRSADKT
KSALQKMVDDDDSSSLSSLSDSDVEFEDVPSAKRQKVDAQSVKESDDEDDDEDIEFEDVP
NHEPQLEVEPVISGDLELTLYRNSHVPLASEMSKKGPSKREKQIRNVTHCIHVQYLLWHN
ATRNSWLCDPEVQATMISHLTPRLWEEVDRWRTNSGLEKDDAVEEKAAPTSKSGARGKST
TKGKTARSRGKQPASKSTRDWSDAADRLENGVPNMSHGDPLFRLMKSLSAWWKQRFTTTA
PGLRKKGYMDVRRLAKWRVAFEEEEHDPERFGEKIHNLEDFRTHARKCEGSRDVGAQLFT
ALLRGIGLEARMVANLQSLGFGWSKSEEADEEKAVGDASTNGTATPIKTNAKKSQAAAKT
RKTPARPTSRRTRKNDKDSLKMDLDDSDEYLEPISDDDSDDNSVVDVTADFKKPKAALKI
YDKDLDFPIYWTEVLSPVTKKWLPVDAIVKSIVGTNRELVESLEPRGAKADKAKQIMAYT
VAHSQDGTAKDVTVRYLRKQLFPGRTKGSRMGVEKIPIYNRHGKIKRYEKFDWFKFALSG
YVRGTLKYPVTELDQWEDATDLKPAVPEKKEVKEGEETLQYFKSSKEFVLQRHLKREEAL
LPSAKPVKVFRNKVKGGKVEEEDVYLRKDVVAVKSAETWHKQGRAPVLGAEPLKHAPYRA
ATTNRRREIAEAEARTGEKVLQPLYSEEQTDWIIPPPIENGVIPKNDYGNIDMFAEHMCP
EGAIHLPYRGAVRVCKRLGIDYAEAVVGFEFGHRMAVPVIQGVVVAEEHEDKVLEEIEKD
EAERKRKEDEKRRKAALGMWRKLLMGMRIAARIEKEYGHLEDKQTKTIVDLRGSDEDDAG
EGGFMKMSEHDEDMAGGFLPEGYDEEEPGDQPKQTSSYFSGAHDAEGVDTLEVDHGDSVE
KPRDFSGLAISRYHEGSPEDKGDEEENNEDMEDEDIKPPKRAQRKVAKPKAKAKAKPRAT
NRRRTRTTQIKSSEDDDDDDDFELSDSE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcatctacctcgcaagaggctacgcacgccgtcgcccgaaggtggcaatggg
gccaagaaggcaggcaagagctccaagtcaagcacacccaatggagttgtgccaccgagg
aaatccacggtgtttgaggatctcaatactagcgacaagaaaagatctgccgacaagacg
aaatctgcattgcagaaaatggtggacgatgacgacagtagctcacttagctcactatca
gactctgatgtcgaatttgaagacgtaccatcagccaagaggcaaaaggttgatgcgcaa
tctgtgaaagagtcggacgatgaagatgacgatgaggatattgagttcgaggacgttccg
aaccatgaacctcagctcgaagtggagcctgtcatctcgggtgatctagaactcacattg
taccggaatagtcatgtacctttggcatctgagatgtcgaagaagggaccatcgaagcgc
gaaaagcaaatacgtaatgttacgcactgcattcacgtccaatatcttctttggcataac
gcaactcgcaactcttggctctgtgacccagaagttcaggcgaccatgatatcacatctg
acgccacgactctgggaggaagttgaccgttggcgcaccaatagtggacttgaaaaggat
gacgctgtggaggaaaaagcagcgccaacatcaaagtctggagctcgtggaaaatcgacc
accaaaggaaagacggccaggtcgagaggaaagcaaccagcttccaagtctaccagagat
tggagcgatgctgctgatcgacttgaaaatggtgtccccaatatgtcccatggtgatcct
ctttttaggctcatgaagtctctatctgcgtggtggaaacagagattcacaactacagcg
ccaggactgcgaaagaaaggctacatggatgtgaggagactagccaagtggagggttgca
ttcgaagaggaagagcacgaccctgaaaggtttggtgagaaaatccataatttggaagat
ttcagaacgcatgcgcgaaagtgcgaaggcagtcgagatgtgggtgcgcaactcttcacg
gccttgttgagaggcattggtctcgaagctcgaatggttgcaaacctacagtcattaggg
tttggttggagcaaatccgaggaggcagatgaagaaaaggctgtgggcgatgcctcgact
aatggcaccgcgactcctatcaagacgaacgccaaaaagtctcaggcggccgcaaagaca
agaaagacgccagcgcgtcccacgagtcgccggaccaggaagaacgacaaggattcactc
aaaatggacttggacgattcagacgaatatctagagcctattagtgatgacgatagtgac
gacaattccgttgtcgatgtcacggcagatttcaaaaagcccaaagccgcactcaagatt
tacgacaaagatctcgactttcctatctactggaccgaagtattgtctcctgttacgaag
aagtggctaccagttgatgctatagtaaagtccatcgttggcaccaatcgagaactcgtt
gaatcattggagcctcgcggtgccaaagcagacaaggcaaaacagatcatggcatatacc
gttgctcattcccaggatggcactgccaaggatgtcacggttcggtatctgagaaaacaa
ctctttccaggtcgcaccaagggctctcgtatgggagtcgagaagatccccatctacaac
agacatggcaagatcaagcgctacgaaaagtttgactggttcaaatttgccctcagcgga
tacgtccgtggcacactcaagtacccagtcactgagttggatcaatgggaagatgctaca
gatttgaagccggcagtcccagagaagaaggaagtcaaggaaggggaggagactttgcag
tacttcaagagttccaaggaatttgttcttcaaaggcacctcaagcgcgaagaagccctc
ctaccctcggcaaaaccagtcaaggtcttccgcaacaaggtcaagggcggtaaagttgag
gaggaggatgtgtacctacgcaaggatgttgtcgctgtcaagtctgccgagacatggcac
aagcaaggccgggcacctgtgctaggggctgagccgttgaaacatgctccctatcgagcg
gcgaccacgaatagacgcagagaaatcgcggaagctgaagccaggactggagaaaaggta
ctacaacctctctacagcgaggagcagacggactggatcatcccgccaccgattgagaat
ggcgtgattccgaagaatgactatggcaacattgatatgtttgcagagcacatgtgtccc
gaaggagccattcatttgccttaccgtggtgccgttcgggtttgcaagcggctaggcatt
gactacgccgaagccgtagttggtttcgagtttgggcatcgaatggcagtccccgtcatt
caaggagtggtagtggccgaggaacatgaagacaaggtgctcgaagagattgaaaaggac
gaggccgagcgaaagagaaaagaggacgagaagaggcgcaaggcggctctaggaatgtgg
agaaaactgctcatgggcatgcgcattgcagctagaatagaaaaagaatacggccatcta
gaggacaaacagacgaagaccattgtcgacttacggggaagcgatgaagacgatgcagga
gaaggtggattcatgaagatgtccgaacacgacgaggatatggcgggagggttcttgcca
gaaggttacgacgaggaggagccgggcgatcaaccaaagcaaacatcaagttatttctca
ggcgctcatgatgccgagggcgtggatacccttgaagtcgaccacggcgattcggtcgag
aaacccagagacttctccggacttgccatatcacggtatcatgaaggaagcccagaagac
aagggcgatgaggaagagaacaacgaagacatggaggacgaggacatcaagccaccgaaa
agagcacagcgaaaggttgcaaaacctaaagcaaaagcaaaagctaaacctcgggccacg
aaccgacgacgaactcgaacaacacaaatcaaatcatcggaagacgacgacgacgatgat
gattttgagctatctgactcggagtaa
DBGET
integrated database retrieval system
