Pseudomonas fragi: AV641_04200
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Entry
AV641_04200 CDS
T04285
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00470
D-Amino acid metabolism
pfz00550
Peptidoglycan biosynthesis
pfz01100
Metabolic pathways
pfz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AV641_04200
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AV641_04200
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AV641_04200
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfz01011
]
AV641_04200
Enzymes [BR:
pfz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AV641_04200
Peptidoglycan biosynthesis and degradation proteins [BR:
pfz01011
]
Precursor biosynthesis
Amino acid ligase
AV641_04200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
GARS_A
ATP-grasp_5
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
AMB78329
LinkDB
All DBs
Position
895449..896405
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AA seq
318 aa
AA seq
DB search
MTAAYANLFSTIAPADFGRVAVLFGGKSAERAVSLKSGNAVLEALQSAGVNAFGIDVGDD
FIARITHEKIDRAFIILHGRGGEDGSIQGLLEYMGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHAVLTSEADCISAAKELSFPLIVKPAHEGSSIGMAKVNSADELIVAWAEASK
YDSQVLVEQWITGPEFTVATLRDQVLPPIALGTPHSFYDYDAKYLSSDTQYRIPCGLDST
KEQELMDLTAKACEAIGIAGWGRLDVMQDTDGQFWLLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLSILAASVEARG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcctacgccaatctgttctccaccattgcccctgccgacttcggtcgcgtt
gccgtgttgttcggcggcaaaagcgctgagcgtgcagtgtccctgaagtcgggcaatgcc
gtgcttgaagcactgcaaagtgccggcgtgaatgccttcgggatcgatgtcggcgacgat
ttcatcgcccgcatcacgcacgaaaaaatcgaccgcgccttcatcattctccacggtcgt
ggcggtgaagacggcagcatccagggcctgctcgaatacatgggcatcccttacaccggc
agcggcatccttgcctcggcgctggcaatggacaaattgcgcaccaagcaggtgtggcac
agcctgggtattccaaccccgcgtcatgccgtgctgaccagcgaagccgattgtatttct
gcggcgaaggaactgagcttccctttgatcgtcaaaccggcacatgaaggttcaagtatc
ggtatggccaaagtgaacagcgctgacgagttgatcgttgcgtgggcagaggccagtaag
tacgactcgcaagtgttggttgaacaatggatcaccggtcccgagttcaccgtcgccacc
ctgcgtgaccaagtgctgccacctattgcactgggcaccccgcattcgttctacgactac
gacgccaagtacctgtcctcggatactcagtatcggatcccgtgcgggctcgatagcacc
aaggagcaagaactcatggacctcacggctaaagcctgtgaggcgataggtatcgccggt
tggggccgtctggacgtgatgcaggacaccgatggccagttctggctgctcgaagtcaac
accgctccgggcatgaccgatcacagcctggtgccgatggcggcccgtgctgccggtctg
gattttcaacagctggtgctgtcgattctggcagccagcgtcgaggctcgaggttaa
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