Pseudomonas fragi: AV641_17995
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Entry
AV641_17995 CDS
T04285
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pfz
Pseudomonas fragi
Pathway
pfz00300
Lysine biosynthesis
pfz01100
Metabolic pathways
pfz01120
Microbial metabolism in diverse environments
pfz01230
Biosynthesis of amino acids
Module
pfz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AV641_17995
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfz01002
]
AV641_17995
Enzymes [BR:
pfz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AV641_17995
Peptidases and inhibitors [BR:
pfz01002
]
Metallo peptidases
Family M20
AV641_17995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
AMB80824
LinkDB
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Position
4008107..4009258
Genome browser
AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLACDLIRRPSVTPIDADCQKLMMQRLGDAGFKLEPMRIEDVDNFWATH
GKNEGPVLCFAGHTDVVPTGPVQAWQNDPFDALIDEHGMLCGRGAADMKGSLASMLVAAE
RFVADYPDHKGSVAFLITSDEEGPAHHGTKAVIERFKARNERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAVPALTELAAEHWDNGNAFFPPTSFQ
ISNLNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHGLDWHIDWALSGLP
FLTEPGALLDAVSSSIKQVTGRETKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RVLASDLDVLTEIYYQTLIRLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctttcgccgaccctgcaacttgcctgcgatttgatccgtcgc
ccttcagtgaccccgatcgatgccgattgccagaagctgatgatgcagcgcctgggtgat
gccggcttcaagctggaacccatgcgcatcgaagacgtagacaacttctgggccacccac
ggtaaaaacgaaggcccggtgctgtgcttcgctggccataccgatgtggtacccaccggc
ccggtgcaggcctggcaaaacgatccattcgacgccttgatcgacgagcacggcatgctc
tgcggccgtggcgctgccgacatgaaaggcagtcttgcttccatgctggttgccgccgaa
cgcttcgtcgccgactacccggaccacaagggttcggtggcgtttctgatcaccagtgac
gaagaaggcccggcccatcacggcaccaaagccgtgatcgagcgtttcaaggcccgcaat
gagcgtctggactggtgcatcgtcggtgagccgtcgagcaccactctggtgggcgacgtg
gttaaaaacggccgtcgcggctccctgggcgccaaactcaccgtgcgcggggtacagggt
cacgtggcctacccgcacctggccaaaaacccgattcacctggccgtgcccgcactgacc
gaactggccgccgagcattgggataacggcaacgccttcttcccgccaaccagcttccag
atctccaacctgaactccggcaccggcgccaccaacgtgattcccggcgatctggtggcg
gtgttcaacttccggttctccaccgagtccactgttgaagggctgcaaaagcgtgtcgca
gacatcctcgacaagcacggcctggactggcacatcgattgggcgctgtccggcctgccg
ttcctgaccgagccgggcgcactgctggatgcggtgtcgtcgagcatcaaacaggtgacc
ggccgcgaaaccaaagcctccaccagcggcggcacctcggacggacgcttcatcgcgacc
ctgggtacccaagtggttgaactgggcccggtcaacgcgaccatccaccaggtcaacgag
cgggttctggccagcgatctcgacgtgctgaccgaaatctactaccagaccctgatcagg
ttgcttgcctga
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