Pseudomyrmex gracilis (graceful twig ant): 109852433
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Entry
109852433 CDS
T05003
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109852433
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
109852433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA
AAA_27
ABC_tran
MscS_porin
Motif
Other DBs
NCBI-GeneID:
109852433
NCBI-ProteinID:
XP_020279182
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MDVIEKGYITKIYLENFVTYYKVVVKPTRYLNVIVGPNGTGKSTIVSAIALGLGGKANLM
GRSPQIGDYVKLGETTAKIEIYLKNGSKKDHIITRTFTNEGKSTWTINGVISNIKAVHEF
TANLNIQVDNLCQFLPQDKVQDFSKMDSQALLENTERSVGDPKLLEYHQELKEKRSQFIE
LESDIANKQRLLNSNTQKRDGLQETVSTIKERKLIKKKMVTLRQKRAWMQYDQIRKNLVE
SKEARDTAAKEMRSIDIKLAPINTELEQIKSQVETLKTSLNNHNNKVFAKNKKLKDIMDE
IFKCETKIKEAESTSLRKIQTEQTRDQDIKLAQQQKSKLENDFTLRTKEIGSEESLTRQL
RNIAIRMDENRKVISKISSQNQSLRNSEENVSREIRTFQAHRQTLDIEAKRLDILRQRSI
DAYKAVNWLRENRDKFSTMIHEPMLLSINVTDASYAKYLETLIPVRDLIAFTCESTRDMN
LLMKYLREQQNLTVNAVHSDPTKQVFMQPNVPIEAIRKFGFRHYMSTLFEAPPAIMKYLV
SMYGLNNIPIGTKEVEDNTDRIPHNFTCYFSENNIYSVNTSKYTRETSTRISRVLGNGLL
SIVLDKTKLHQLDEKIKSSQEKRDKILNLIKETDDKIQDETKELDKYRAERSKYQQHIQQ
IQALQSRIRLAAEKIKQMEEDRTSIEDIKAACTKEIKATIMKQLKIYNECNAILKECFTC
VTKSEEVKFTLALLQQSLMTRENEAEELKDKLAKAERIFKQYDEEFQPKKKEAQRLYNEA
LRSTDNISPKDNGFKVFNKVFEKLPATIAEINNELEVCQAKVYCMAKNVDAENVLREYEN
VQNNIQNLSDFVKTKTSELDKMRNEIEVLKEKWLTPLEQLIEKINTNFSSYFAAMDCAGE
VTLAHGENVMDFDQYGLKIKVKFRDADDLQELTRHFQSGGERTVTTAIYMIALQELSRVP
FRCVDEINQGMDAINEKRVFELLVKMTGRPGSSQYFLLTPKLLSDLTYAETVTIHCVFNG
TVVDDNDEDFDEFDTEAFCKELVSIANE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggatgttatcgagaagggttatattaccaaaatttatttggagaatttcgtgacttat
tacaaagttgtggtgaagcctaccagatatcttaatgtcattgttgggcctaatggcact
ggcaagtccactattgtgtctgctatagctcttggtttaggtggaaaggcaaatcttatg
gggcgatcccctcaaataggagattatgtcaaacttggggaaactactgcaaaaatagaa
atttacctcaagaatggttcgaaaaaagatcatataataactagaacatttactaatgaa
gggaaaagtacatggactattaatggtgttatttctaatataaaagctgtacatgaattc
acagcaaaccttaatattcaggttgacaatctttgtcagtttttacctcaagataaggtt
caagatttttcaaaaatggactctcaagcattactagagaatactgaaagatctgttgga
gatccaaagcttcttgaatatcatcaggaactaaaagaaaaacgaagtcagtttatagaa
ttggagagtgatatagcaaataaacaacgattactgaattctaacactcagaaacgtgat
ggattgcaagaaactgttagtacaataaaagaaagaaaactgataaaaaagaaaatggtg
actctgaggcagaagagagcatggatgcaatatgatcagataagaaaaaacttagtggag
tcgaaggaagccagagacactgcagcgaaggaaatgcggtcaatagatattaaactagca
ccgataaatacagaacttgaacagataaagtctcaagtggaaacgttgaaaacttcacta
aacaatcataacaacaaagttttcgctaagaataaaaaattgaaagacataatggatgaa
attttcaaatgtgaaactaaaatcaaagaagccgaaagtacatcgttgcggaaaattcaa
acagaacagactcgggatcaagatattaaacttgcacaacagcaaaaaagcaaactggaa
aacgattttactctcagaactaaagaaatcggatcggaagaaagtttaacgagacaattg
agaaatatagcaatccgtatggacgaaaatcgcaaagtaattagtaaaatcagtagtcaa
aaccagtcgctgagaaatagcgaagaaaacgtcagtcgtgaaataagaaccttccaagcg
caccggcaaactcttgatattgaggcgaagcgtctagatatcttgagacaaagaagtata
gacgcgtacaaagctgtgaattggttaagagaaaatcgtgataaattttcgaccatgatt
cacgaaccgatgttgctgagtattaacgtaacagatgcctcatatgcgaaatatttggaa
accttaataccagtaagagatttgattgcgttcacgtgcgagagcacgcgagacatgaat
ctgctcatgaaatatctgagggagcagcaaaatctaacggtcaatgcggttcattctgat
cctacaaaacaagtatttatgcaaccaaatgttccgatagaggccatcagaaagttcggc
ttcaggcattacatgtcaacactttttgaggcgccgcctgctataatgaaatatctggtc
tcgatgtacggcttaaacaatattcctattggaaccaaagaagtagaggataatacggat
cgtattccgcataactttacttgttactttagcgaaaataatatctattcggtgaacacg
tccaaatatacgcgagaaacttccactagaatatcacgagtcttgggcaacggcttgttg
tcgattgttttggataaaacaaaactgcatcagctcgatgagaaaataaaatcttcgcaa
gaaaaaagagacaaaatcttgaatctcattaaagaaacagatgacaaaattcaagacgaa
acgaaggaattggacaaatatcgagctgaaagaagtaaatatcagcagcacattcagcaa
attcaggcattacaaagcagaattcgcttggccgcggagaagatcaaacagatggaagaa
gaccgaacgagtattgaggatataaaagcggcgtgcactaaggagatcaaggctactata
atgaaacagttaaaaatatataacgaatgtaacgcaattttgaaagaatgttttacctgc
gttacaaaatccgaagaagtgaaatttactctagcattgttacaacaatctttgatgacg
agagagaacgaagccgaagaactgaaggataaactggcgaaagcggagagaatatttaaa
cagtacgatgaggaatttcagccaaagaaaaaagaagctcaaagattgtacaatgaggca
ttgagaagcacagataatattagtccgaaggataacgggttcaaagtttttaacaaggtc
tttgaaaagttgccggctaccatagccgaaataaataacgagttggaagtctgtcaagct
aaggtttattgcatggcgaaaaatgtggacgccgaaaatgtattacgcgaatatgagaac
gtgcaaaacaacattcaaaacttatcggacttcgttaaaacaaaaactagcgaactggat
aaaatgagaaatgagattgaggtgttgaaagaaaagtggctaacaccgctggaacaattg
attgaaaagataaatacgaactttagttcgtatttcgccgcgatggactgtgccggcgaa
gtcacgcttgcgcacggcgaaaatgtcatggattttgatcagtacggattgaaaatcaaa
gtaaagttccgagacgctgacgacttgcaggaattaacgagacactttcaaagcggtggt
gagagaaccgtaacgactgccatatacatgatcgcgttgcaagaattatcgcgcgtgccg
ttccgctgcgtggatgaaattaatcagggtatggacgcgattaatgaaaagcgtgttttt
gaattacttgtcaaaatgactggcaggccaggtagttcgcaatattttctgcttacacca
aagcttttatctgatttaacgtacgctgaaacggtaacgatacactgcgtatttaacggg
acggttgttgatgataacgatgaagatttcgacgagttcgatacggaagccttctgtaaa
gaactcgtatcgattgctaacgaatag
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