Pseudochaenichthys georgianus (South Georgia icefish): 117445122
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Entry
117445122 CDS
T09629
Symbol
crocc2
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117445122 (crocc2)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117445122 (crocc2)
BRITE hierarchy
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
117445122
NCBI-ProteinID:
XP_033936432
LinkDB
All DBs
Position
4:43461400..43518393
Genome browser
AA seq
1931 aa
AA seq
DB search
MTSEREQGAHSGLEAVIQKLEESLLHSDGCSGQSGLTLGADGQESGVTATPVSTCIRQII
PRNLAEQPAGESSEVSGLEESRALREQLSSSQMDRDQPRVKQASLTDRLDQMLMLRSALD
SDQDSVSADSVLIKNKERAYSQKLQAYQEAQLRQVELVQKLQIKVLQYKKRCAELEGHVL
KKTSESENMRLLLQGHLDSAQQTEQDLNSTFQKKCAQLEEEEQRWASVSQVNYMLREQLD
QAGTDNQGLTESLWKAREDVDLSDLRLRREQETCASRLSREQARVRALWRQAASLRSTFN
QLRTSTDRTLSDMRGECGAASRQLHVACMDLEARVTQESTSSGVEVSALESQLKDTLTEA
MQLQGSWDTEKVKLNSKILELTDTVKHLRSQNSEKDSSLSTMQSSLDRMETRRTEERAEM
ELLYTETQALQKTLSHVHQVGDGSGSEHVSSSPVRNILMAVQNGLSEHQNQTQDLRGRLE
AALDQEETLRGHLQERDAERKELQQKVLEVRRESQEAESALDESLRDSNRHRCSVELLSS
EKRSLESLLSGLQQEVDSQHATLEVLRGSTLELQRQHDLLRQQREDLEMQLACQRTEAQR
GERSLEELEGRLSDVRRELVTVKEALSQRTLQKEVLENDRASLALALSKMESQCATHELA
LTNLKNQEAAVKDSLAKMAALSEGLAEDKVELNRILLQTEGEKTQLGERRREAETERAAA
REETARVQQQMMNLLAEKQALESSRSHMQDLCQKLEAELSLLQKESAQAQEQHAQVNWQM
QDVCEELCACRKELQTQTTGLKRASHDREELAKDRAALHARLKSADRKACGTAQEMVALR
AEKESLETALFESQELASSLEAQCTRKEGERRSLLLANEALTRDAARMREDGEQRVERAV
EAQTELEKKLAQVKRKTLLTLNNTEQLHREQLEAERQLKEQQYAELTAEREQAEEQLRRQ
CEEQLRRQCEEQLRRQCEEQLRRQKELQQVQEEVARLQQDFNQRLLQAESEKQQALSQKE
AEKAALTEKLAALQQELATAGMKLECMQREARTKHEQDKNATAVLRSELHDFRSQFEESL
KSHENAKRSLMEQVKELYQLREHTQQELEEAKDGLIRARTELMEAHRELQECAQEQDKQR
KEALDLRRLMGDGTRETEAVQASNQELRALIKRAESDNNRLRRAFEERDQKVSVSEECGN
SMLQEVTTLRSSLRELEKSRLQARRNLQELRRQVKVLKGEDSRQKQELRELRALVCQEEE
ARREASSLRQSVLECEAGREASLNEVSGLQRRVVELETSEHQNRELLQDRKAHQQQRERR
HRGTTAQLEEALEEAKNKVTELSGQVGVAGSRVHGLEEQLGLADANRRDLELKLARLYSA
LRQTLGISQILLSGTPGSRRRSSSPWRKHLQGKGGDGETDGPVLSLAHGEDEELDVDSLH
SVLREFQQELRDTQRDRDEAWAQIVGLSQQITGLCGSQEKSATQLLQLQDTLKQSEQGKR
EMSECLQETQTALSLQEKVACRTEREKRHLEAEVARFRTGLQAAEAESRALQDELELFQG
SQSRAKVEQQNLKESLQAAEDRLSRLELSQRSLEGELQRAQLRAAALEAESGALQERLTE
LRRKLGESEDRGVTLRVSEERLVTSLARAEQHESQRREQLHTLSHSLSDSRSSSGALQAQ
TSQLQRALTASEQGRRLLQERLDKTRDTLSERKRMNHTLTEQTQSLRRAQDHLEIQRSEL
EEHNRALKESLKQQQEAELQALGGSQQLQRDKQELQDKVTNLQSSLQKLQSERAEMERVL
TRLGEDMSGLRKTLEKVEMERLRVEEEAASAARETEQLGQELAERQAEVQTVQAQMSQSQ
RSHAQHLLEVTARHHRELHVETDGLRDTQLQVEQALESREKAHRQRVRCLEQQVLTLKEQ
LDHETRRREAY
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgaacgggagcagggtgcacactctggactggaggctgtgattcagaagttg
gaagagtctctgcttcactctgatggatgttcaggacagagtggtctgacacttggagct
gatggacaggagtctggtgtcactgctacgcctgtctccacctgcatccgccagatcatt
ccccgcaacctggcagagcagccagccggtgagagctctgaggtcagcgggctggaggag
agcagggccctgagggagcagctctcctcgagccagatggaccgtgaccagccacgagtc
aaacaggccagtctcacagacaggctggatcagatgctgatgctgaggtcagcactggac
tcggaccaggacagcgtatctgcagattctgtgctcataaagaacaaggagagagcttac
agtcagaaactgcaggcataccaggaggcccagctgagacaggtggaacttgttcagaag
cttcagatcaaggttcttcaatacaagaagaggtgtgcggagctggaaggacatgtgctg
aagaagacctcagagtccgagaacatgaggttgttgctgcagggccacctcgactccgcc
cagcagacagagcaggatctcaacagcaccttccagaagaagtgtgctcagctggaggag
gaggagcagaggtgggccagcgtcagccaagtcaactacatgctgcgggaacaactggat
caggccggcacggacaatcaggggctaacggagagcttgtggaaggctcgtgaagatgtt
gacttaagcgatttgcgtctgcgcagagagcaagagacgtgcgcctcccggctgagtcgt
gagcaggctcgtgtcagagcactgtggcgccaggctgcttccctgcggagtactttcaac
cagctaaggacttccactgacaggaccctgtctgacatgcgcggggagtgtggtgctgcc
agccggcagctgcatgttgcctgcatggacctagaggccagagtgactcaggagagcacc
tctagtggtgtggaggtgtcagctctggagagccagctgaaggacacgctgacagaggcc
atgcagcttcagggtagctgggatacggagaaagtcaaactgaactccaaaatcttggag
ctgactgacacagtgaagcacctccgcagccagaacagtgagaaggactccagcctaagc
accatgcagagcagtctggacaggatggagacgaggagaacagaggagagagcagagatg
gagctgctctacacagagacccaggccctccagaagacgttatctcatgttcaccaggtg
ggtgatggcagtggatctgaacacgtgtcctcctctcctgtgaggaacatcctgatggct
gtgcagaatggtctctcggagcaccagaaccagacacaggacctgcgtgggcgcctggaa
gcggctctggaccaggaggaaactctgcgtggtcacctgcaggagagagacgctgagagg
aaagagctgcagcagaaggttctggaagtgaggagggaaagtcaggaggcggaaagcgct
ctggatgaaagcctcagagacagcaacagacaccgctgctcagtggagctcctctccagt
gagaagcgcagcctggagagtctgctctccgggctgcagcaggaggttgactcccagcat
gccacgctggaggtactgcgaggctcaacgctggagctccagagacagcacgacctcctg
aggcagcagagggaggatctggagatgcagctggcatgccagcgcacggaggcccaaaga
ggcgagaggagtctggaggagctggaggggaggctgtcagacgtgcgcagggagctggtg
acggtgaaggaggctctgagtcaaaggaccctgcagaaggaggtgttggagaatgatagg
gccagcctggctctggctctcagcaagatggagtcccagtgtgccacgcatgagttagca
ctcaccaacctaaagaatcaggaggctgccgttaaagattctctggccaaaatggctgcc
ctgagtgaagggttggccgaagacaaggtggaactcaatcgaattctgctgcagacagaa
ggggagaagacgcagcttggtgaacgcagaagggaagctgaaacggagcgagcagcagcg
agggaggagacggcacgggtgcagcagcagatgatgaatctgctcgctgagaaacaagcc
ctggagagctcccgcagccacatgcaggatctctgccagaagctggaagcagagctgagc
ctgctgcagaaggagagtgctcaggcccaggagcagcacgcacaggtcaactggcagatg
caggatgtgtgtgaggagctgtgtgcgtgcaggaaggagctgcagacacagaccacaggc
ctgaagagagccagccatgacagggaggagctggccaaggacagggcggctctccacgcc
aggctcaagtctgctgaccgaaaggcctgtggtactgcccaggagatggttgcacttaga
gctgagaaggagtccctggagacggctctgttcgagagccaggagcttgcctcttctctg
gaggctcagtgcaccaggaaggagggggagaggcgcagcttactcctggctaatgaggcc
ttgacgcgtgatgctgctcggatgcgcgaagatggtgaacagcgggttgaacgagctgta
gaagcgcagactgaactggagaagaagctggcccaggtgaagaggaagaccctgctgacc
ctgaacaacacagagcaacttcaccgagagcagcttgaagctgaacgccagcttaaggag
caacaatacgcggagctgacagctgagcgggagcaggcagaggagcagctgcgcagacag
tgtgaggagcagctgcgcagacagtgtgaggagcagctgcgcagacagtgtgaggagcag
ctgcgcagacagaaggagctccagcaggtgcaggaggaagtggcccggctgcagcaggac
ttcaaccaacgcctgctgcaggctgagagtgaaaagcaacaggctttgtcccagaaggag
gcagagaaggccgccctgacggagaagctagcagccctgcagcaggagctagccacagca
ggcatgaagctggagtgcatgcagagggaggcacgcaccaaacacgagcaggataagaat
gctacggctgtcctccggtctgagctgcatgatttcaggtctcaatttgaggagtctttg
aagtcccatgagaatgctaagaggagtctaatggagcaggtaaaagagttataccaactg
agagaacatacacaacaggagttggaggaggcaaaggatggacttattagagcacggact
gagctgatggaggctcacagagagctccaggagtgtgcacaggaacaggacaagcaacgg
aaagaggctcttgacctgagaaggctaatgggagacgggaccagagagacagaggctgta
caagcctctaaccaggagctgagagctctcatcaagagagcagagagtgacaacaacaga
ttgagacgagcatttgaggagagggatcagaaagtgtctgtctcagaagaatgtgggaac
tccatgctccaagaggtaaccactctccggagcagtctgcgagagctggagaagtctcgc
ctgcaagcacgcaggaacctgcaggagctgcgcagacaggtgaaggtccttaaaggcgag
gacagccgtcagaagcaggagctgcgagagctgcgggccctagtgtgtcaggaggaggaa
gctcggcgcgaggcttcctctctcaggcagagcgtgctggagtgtgaggctggcagagaa
gcatcgctgaacgaggtctcaggtctgcagcgccgtgtggtggaactggagacatcggag
catcagaaccgcgagctgctgcaggacagaaaagctcatcagcagcaacgagagcgcagg
cacagaggaaccaccgcccagctggaggaagccctggaagaggccaagaacaaggtaacg
gaactctctgggcaggttggcgttgctggaagcagagtccacggcctggaggagcagctg
ggcctggccgatgccaaccgcagggacctggagctgaagttggcgaggctgtattcagcg
ctgcgccaaactcttggcatcagccaaatccttctgtccggcacacctgggtcccgcaga
cggtcttcctctccctggaggaaacacctgcaagggaaagggggcgacggtgagacagat
ggaccggtgctgtccttggcgcatggtgaagatgaagagctggacgttgactcattgcat
tcagtcctgcgggaattccagcaggaactcagggacacacaaagagacagggatgaagcc
tgggctcagatagtgggtctcagtcagcagataacagggctctgtggcagccaggagaag
tcagccacacagctgcttcaacttcaggataccttgaagcaatcggagcagggaaaaaga
gagatgtcagagtgcttgcaagagacgcagacagccctttccttgcaggagaaagtagca
tgtcgcacagagagggagaagagacaccttgaagcggaggtcgctcgattcaggactggt
ctgcaagctgctgaggccgagtccagggcactgcaagacgagctggagctctttcagggt
tcacaatcacgtgccaaagtcgaacagcagaatctaaaggagtctctccaagcagcagag
gacaggctgagccgtcttgagctctcccagcgcagtctggaaggagagctgcagagggcc
cagctcagggccgcagcactggaggccgagtcaggggccctgcaggagagactgacagag
ctgaggaggaagctgggagagagcgaggaccgcggtgtcacgctgagggtcagcgaggag
cggttggtcacatcactggctcgcgctgagcagcatgagagccagcggagagaacagctc
cacacactgtcccacagcctcagtgacagcaggagcagcagcggggccctgcaggcgcag
acctctcagctgcagagggctctgacagccagtgagcagggccggaggctgctgcaggaa
cgtttggataaaacacgagataccctttcagagagaaagaggatgaaccacacactaacc
gagcagacccagagccttcgaagagcccaagaccacctagagatacaaaggtctgagctg
gaggaacataacagggcactgaaggagagcctgaagcaacagcaggaggccgagctgcag
gccctggggggctcccagcagcttcagcgagacaagcaggaactccaggacaaggtcacc
aatctgcagagttctttgcaaaagctacagagtgagagagcagagatggagagggtgcta
acgcgcctcggtgaagacatgtcggggctcagaaagactctggagaaggtagagatggag
aggctgagggtggaggaggaggcggcgtctgctgccagagagacggagcagctgggacag
gagctggctgagaggcaggcggaggtgcagacagtgcaggctcaaatgtcccagtcgcag
cgctcacatgcacagcacctcctggaggtgactgcccgccatcaccgggagttacatgtg
gagacggatggtctgagagacactcagctccaggtagagcaggccttggagagcagggag
aaggctcaccgccagagggtgagatgcttagagcaacaggtgctgactctcaaagaacag
ctggatcatgagacgagaagacgagaggcttattga
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integrated database retrieval system
