Pseudochaenichthys georgianus (South Georgia icefish): 117446252
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Entry
117446252 CDS
T09629
Symbol
ca16b
Name
(RefSeq) receptor-type tyrosine-protein phosphatase gamma isoform X1
KO
K16667
receptor-type tyrosine-protein phosphatase gamma [EC:
3.1.3.48
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117446252 (ca16b)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117446252 (ca16b)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117446252 (ca16b)
BRITE hierarchy
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
DSPc
Y_phosphatase3
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
117446252
NCBI-ProteinID:
XP_033938220
EnsemblRapid:
ENSPGEG00000009711
LinkDB
All DBs
Position
5:18222454..18327226
Genome browser
AA seq
1424 aa
AA seq
DB search
MRRIREPSYWWILSLMLLTLPKHKDCHPVESGGQPHLAGEEHHGSTGIMRERRAAGDPYW
SYSDMGWKQRPDLEWAGGVSGNHGPRGWAAAYPECSAKNQSPVDITDERALVSEEYQELV
FDKFNTESSNQTTMKNTGKTVAVLLKDDYFVRGAGLPGRFKAEKIEFHWGHSNGSAGSEH
SINGRRFPVEMQIYLYNSDDFDSLSAAIKERRIIAAMSVFFELGQKDNPAVEPIIQGLKG
VVHHEKETNLRSFILRDLLPSSVNNYYRYTGSLTTPPCIKVVEWIIFSRPVYLSHSQLEA
FYSIFTTEQQDHVKSVEYLRNNFRPLQDLDDRKVFKSAVKDAWQRDLTDVLSSPHSTESS
RVCSSAPVNMKIQPLNQTALMVTWERPLTVYHPPITSYMVSYSWVKREVANEMTFTNSGD
QSMRAIITNVSPEVLYLFRVQAVCQHDLRSDFSQTLLFRANTTRIFEGSRIVKTGMPTIS
PASSADMAPISSGSSTWTSSGIHFSIVSMATGMGPSSSGSQATVASVVTSTLLAGLGVGG
GVISSLPSSVWPTQTPPATQNPTRPSTPPAKSSTEQQAAAPGPDKDTQSEEKQAASEGEE
EEEGEREGEQDEEEDEKKKKSKPAPDNEKKQANSTVAKEPLIATPASTAKEKGEGKPTVK
GTAAPVCTGGDELVNVETNLTDVNAAPTQEPRNDTAEMQIPQSSTLSPKISSDGRSIWPF
SVHTDTTMLSNVTRVPHPGMGRMVWIVPLVVVSALTLLCLIMLLIVMIYWRRFFQTAHFY
VEESSSPRVVANENIPIIPIPDDMEAIPVKLFIKHIMELYKNNLQGFSEEFEEVQRSTAD
LKITSEHSNHPDNKHKNRYINIVAYDHNRVKLRALAGKDAKHSDYINANYVDGYNRPRAY
IAAQGPLKSTFEDFWRMVWEQNTGIIIMITNLVEKGRRKCDQYWPTENSEQYGNIVVTLK
STKVHACYTLRRFLIRNTKVKKGQKGNPKGKLNERIIVQFHYTQWPDMGVPEYTLPVLTF
INRSSAARTADMGPVLVHCSAGVGRTGTYIVIDSMLQQMKDKSTVSVLDFLKHIRTQRNY
LVQTEEQYVFIHDALMELIMSRDTEVPAWQLHSYVNSILTPNSAGRTLLEKQFRLLTQCN
ARFVECFSAHKDCNKEKNRNSSVVPSERARVGLATLPGMKGTDYINASYVMGYFRSNEFI
VTQHPLPHTTTDFWRMIWDHNAQIIVMLPDNHGLAEDEFVYWPSREESMNCIAFTVTLIS
KDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPLSSTFELINVIKEEAM
TRDGPTIVHDEYGAVSAGMLCALTTLSQQLENEGVVDIYQVAKMINIMRPGVFTDIEQYE
YLYKAMLSLVGNREDGLSPMHMDTNGVVVIADESDPAESMESLV
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgcggagaatacgggaaccaagttactggtggattttatccttaatgcttttaaccttg
cccaaacacaaagactgtcatcctgttgaatctggtggccaacctcaccttgctggagaa
gagcaccatgggagcacgggcataatgagggaaaggagggcagcaggtgacccctactgg
tcctattcagacatgggctggaagcaaagaccggatcttgaatgggcgggtggagtgagt
ggaaaccatggacctcgaggatgggcagccgcatacccagaatgttctgcgaagaaccaa
tcacctgtggacattacagatgagcgagctttggtttcggaggagtaccaggagctggtg
tttgacaagttcaacactgagtcctccaaccagaccaccatgaaaaacactggaaagaca
gttgctgttctcctgaaggatgactacttcgtaagaggtgctggactgccagggcgtttt
aaggctgagaagattgagtttcactggggccatagtaatggatcagcaggctcagaacac
agcatcaatggcagaaggtttcctgtagagatgcagatttacctttacaattcggatgac
tttgacagcctcagcgctgctatcaaggaaagacgcatcattgctgccatgtccgtcttc
tttgagctggggcaaaaagacaatccagctgtagaacccatcatccagggattgaaagga
gtagtgcatcacgaaaaggaaacaaacctcaggtcgttcatcctgagggatctgctgccg
tcgtccgtgaacaattactaccgatacaccggctctctgaccaccccgccctgcatcaag
gtggtggagtggatcatcttctccaggcctgtgtatctgtcccactcacagctggaggcc
ttttactctatctttacaacagagcaacaggaccacgtcaagtctgtcgagtacctgagg
aacaacttccggcccctgcaggacctggatgataggaaagtctttaagtcggctgtaaag
gacgcatggcagagagatttaaccgatgtcctgagtagtcctcacagcactgagtcttca
agagtgtgcagcagtgccccggtgaacatgaagatccagccgctcaaccagactgcgctg
atggtgacctgggagcgccctctgaccgtctaccacccccccatcaccagttacatggtc
tcctacagctgggtgaaacgtgaagttgctaacgaaatgaccttcaccaacagtggggac
cagagtatgagagccatcatcactaatgtgtcccctgaagtgctgtacctgttcagagtg
caggcagtgtgtcagcatgacctgcgcagtgatttcagccaaacactgctgttcagagct
aatacaacaagaatatttgaagggtctcgtattgtgaagactggcatgcccacaatttct
ccagcctcctcagcagacatggctcccatcagctctggttcatccacttggacgtcctct
ggcatccacttttccattgtctccatggcaacggggatgggcccctcctctagtggcagc
caggccacggtggcatcggtggtgacgagcaccttgctggcaggcttgggcgtaggcgga
ggggtaatctcttctttgcccagctctgtttggcccacacagacgcccccggcaacgcag
aatcccactcgtccttccaccccgcctgccaagtcgagcaccgagcagcaggcggcggcc
ccgggccctgataaagacacccagtctgaggagaagcaggctgcaagtgagggcgaggag
gaggaggagggggagagagaaggagagcaagatgaagaagaggatgagaagaagaagaag
agcaagcctgcacctgataatgagaagaagcaggcgaacagcactgtggccaaagagcct
ttaatcgccacccccgcatccacagccaaagagaaaggagaagggaagcctacagtcaaa
ggcaccgcagcacccgtgtgcactggtggcgatgagctggtcaacgtagagacaaatctc
actgatgtaaatgcagcccccactcaggagcctcgtaatgacactgcagagatgcagatt
ccacagagctccacactgtcaccaaaaatcagtagtgatggcaggagtatctggcctttc
tccgtacacactgacacaaccatgttgtccaatgtgacccgggtccctcacccggggatg
gggaggatggtgtggattgtccccttggtggtggtgtccgctctcacactgctctgcctc
ataatgctgctgatcgtgatgatctactggaggagatttttccagacagctcacttctat
gtggaggagagcagctctccacgggtggtggccaatgagaatataccaatcatccctata
ccagatgacatggaggccatccctgttaagctgtttattaaacacatcatggagctctac
aagaacaacctgcaaggtttttctgaggagtttgaggaggtccagcgctccacagcagac
ctgaaaatcacatcagaacactccaatcatcctgacaacaagcacaagaacagatacatc
aacattgtggcctacgaccacaacagggtgaaattgcgagctctggcggggaaagatgcc
aaacattcggattacatcaatgccaactacgtggatggctacaaccggccgagagcttat
atagctgcccagggtcctctcaagtctacattcgaggacttttggaggatggtgtgggag
cagaacacaggaatcatcataatgatcaccaacttggtggagaaaggacgaagaaaatgt
gaccagtattggccgacagagaacagcgagcagtatgggaatattgtagtgacgctgaaa
agcaccaaagtacacgcctgctacacactgcggcgtttccttataaggaatactaaagtt
aaaaagggtcaaaaggggaacccaaaggggaagctaaatgaacgcatcattgtgcagttt
cactacactcagtggcctgacatgggagtaccggagtacaccctccctgtcctcaccttc
atcaaccgctcgtcagcagctcgcactgcagacatgggcccggtcctggtgcactgcagt
gcaggggttgggcgcacaggaacgtacattgtcattgacagcatgctacaacagatgaag
gacaaaagcacggtcagcgtcctggattttctcaaacatatccgcacacaacgcaactac
ctagttcagactgaggagcagtatgttttcatccacgacgctctgatggagctcattatg
agcagagacacagaggtgcctgcctggcagctgcacagttacgtcaatagcatcctcacc
cccaactcggcaggccgcaccctgctggagaagcagttcaggctgttgactcagtgcaac
gcgcgctttgtggagtgcttcagtgcccacaaagattgcaacaaggagaagaaccgcaac
tcctcagtggtcccctcggagcgagcaagggtcggactcgccactctgcctggaatgaaa
ggaacagattacattaatgcatcctacgtaatgggttacttcaggagtaatgagttcatc
gttacccagcatcccttgccccacaccaccacagacttctggaggatgatttgggaccac
aacgctcaaataattgtcatgttgcctgataaccatggcctggctgaggatgaatttgtt
tattggccgagtcgggaggagtccatgaattgcattgccttcactgtcacactcatcagt
aaggacagactgtgcctctccaatgaggagcagatcatcatccatgacttcatcctggag
gccacccaggatgactacgttctggaggtgagacactttcagtgccctaaatggcccaac
cctgatgctcctctcagcagcaccttcgagctcatcaatgtcatcaaggaggaggccatg
actcgagatggccccaccatcgtgcacgatgagtatggagccgtgtcagcgggcatgctc
tgcgccctcaccacactgtcccaacagctggagaacgagggcgtcgtcgacatctatcag
gtggcgaagatgatcaacatcatgagaccaggcgtcttcacagatatagagcagtacgag
tacctttacaaagccatgctcagcctggtgggtaacagagaggacggcctgagccccatg
cacatggacactaatggagtggtggtgatcgcagacgagtcggaccccgcggagagcatg
gagtcgctcgtctga
DBGET
integrated database retrieval system
