Pseudochaenichthys georgianus (South Georgia icefish): 117449746
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Entry
117449746 CDS
T09629
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117449746 (smc5)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117449746 (smc5)
BRITE hierarchy
Motif
Pfam:
AAA_23
SMC_N
AAA_21
FtsK_SpoIIIE
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
117449746
NCBI-ProteinID:
XP_033943500
EnsemblRapid:
ENSPGEG00000005997
LinkDB
All DBs
Position
7:21400453..21425147
Genome browser
AA seq
1073 aa
AA seq
DB search
MASSSKKQRRSQAFGSQTSNSIANDSQPDGTGVEGRFVEGSIFRLTMKNFLTYDYSVVNP
GANLNMIVGANGTGKSSIVCAICLGLAGKAAILGRGDKVGLYVKRGCSKGFVEIELYKTE
GNVVIHREIHVENNQSLWMLDGKICSQKAVEEVVKALQIQVGNLCQFLPQEKVGEFAKMS
KIELLEATEKSVGPPEMFTYHCELKNFRTKERELENIVKEKASFLEKAKQRNERNKHDVK
RYYEKKRHLDVIVLLDQKKPWVEYETTRKELEGLKKERDEAKKQLSALKQAHAPMLKKIQ
LIENQLKPSEAQIKATTDAIKEASLKCNQKKDQMDRKNKEIENIKQTQKIKQFEAADHQK
GISNTRRTIDAFKAELAKVTDQPDVMPQINAVNIELRQIREKRTQIEGEKSDLRRDKDNL
HAETKMLERKLRDMNNMMNVKEEKLRGRHRDTHAAIQWLRRNRQLFEGNVHEPMMLVINV
KDPRFAKYVENHISFSDLRAFVFQRKGDMEKFMTEVRDKMNLRVNAISAPEVSCSNKQSS
RNIESLKHFGFFAYLREMFDAPDEVMSYLCQQYKVHDVPVGNEQTKAMIKRVIEEPYLKV
LYTTEERYTLKRSHYSNTISTSNSAVYPSQYLSITVDAKEKLQLEQQMKDCESKLRDIDE
RLKVLQAEAVTLDRRDNELLAEKKRLSEVKGKKRQLEQKISSKQDSLRQMEQNVIDLQTI
EEKTKEKVAAVNQQKVSLVAGIMEQIKLKVKLTMEKVYLTLETVGLMAQKSKMENDCRES
ASELQTTDQKCIRLEQRKVQLTEQCKGLMKKAKSICRMQHDESLPEELRKAFSKLPDTLD
DIDTMLNEERSRAECFTGLSENIVDEYKKREQENKDLEKELEDKSNALTSYRQNISEAKE
RWLNPLKQLVEQINVKFSDFFRSMQCAGEVDLHSENEEEYDKYGIRIRVKFHSSTQLHEL
TAYHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTACKETT
SQYFFITPKLLPNLKYADEMTVLCVHNGSQMLSPNLWDEKAFIRRSLRRQVKP
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccagcaaaaaacagcgacgaagtcaggcgttcggctctcagacttccaac
agcatagcgaacgacagtcagcccgatgggaccggagtggagggtcgttttgtggaggga
tcgatatttcgcctcaccatgaaaaacttcctgacatacgattactcggtggtgaatcct
ggagctaatctgaacatgatcgttggagccaacggaactggcaagtccagcatcgtgtgt
gccatctgtctgggtctggccggcaaggccgccatcctgggccgaggcgacaaggttggg
ctctatgtcaaacgcggctgcagtaaaggattcgttgagatcgaactgtacaagactgag
ggtaatgtagtgatacacagagagatccatgtggagaacaaccagtcactgtggatgctt
gatggaaagatctgcagccagaaagcagtggaagaagttgtcaaggctctgcaaatccaa
gtcggcaacctctgccagtttctgcctcaggaaaaagtgggagagtttgcaaagatgtcc
aagattgagttgctggaggcaacagagaagtcagtgggaccacctgagatgttcacatac
cactgtgagctcaaaaacttccgcaccaaagaaagggaactggagaacattgtgaaggag
aaggccagtttcctggagaaggccaagcagaggaatgagaggaacaaacatgatgtgaag
cgttactacgaaaagaagagacacctggacgtgattgtgttacttgaccagaaaaaacca
tgggtggagtatgagacaacccgtaaggagcttgagggattgaagaaagagcgagacgaa
gccaaaaagcagctctctgccctgaagcaagcgcacgcgcccatgctgaagaagattcag
ctgattgaaaaccagctgaaaccctctgaggcccaaataaaggccacgactgatgccatc
aaagaagcctctttgaagtgcaatcagaaaaaggatcagatggatcgaaaaaacaaagag
attgaaaatattaaacaaacacaaaagattaagcagtttgaagcggcagaccaccagaag
ggaatcagcaacaccaggcggaccattgacgcctttaaggcagagctcgccaaagttaca
gaccaacccgacgtgatgccgcagatcaatgccgtcaatatcgaactgaggcaaatccga
gagaagagaacccagatcgaaggggagaagtccgacctacgcagggacaaggacaacctc
catgccgaaacaaaaatgttggagagaaagctcagggacatgaacaacatgatgaatgtc
aaagaggagaagctgagaggacgccacagggacacacacgctgccatccagtggctcaga
cggaacagacaactctttgaagggaatgtccatgagccaatgatgctggtcatcaatgtg
aaagatcctcgcttcgccaagtatgtggagaaccacatctccttctcggacctgcgggct
tttgtcttccagagaaagggcgacatggagaagttcatgacagaggtccgtgacaagatg
aacctgagggtgaacgccatttctgctccagaggtgtcgtgttctaataaacagtcgtct
agaaatattgagtccctaaagcattttgggttcttcgcctaccttcgggagatgtttgac
gcgcctgatgaggtgatgagttacctctgccaacagtacaaggtgcacgacgtcccggtg
ggcaatgaacaaactaaagccatgatcaaaagggtgattgaagagccctacctcaaggtg
ttatacacaacagaggagaggtacacattgaagaggtcccattactccaacacgatcagc
accagtaactctgcagtgtacccctctcagtacctctccatcactgtggacgctaaagag
aaactgcagctggagcagcagatgaaggactgcgagtccaagttacgggacattgatgag
cggctgaaggtcctgcaggcggaagccgtcacactggatcggcgtgacaatgagttattg
gcagagaagaagcgcctctctgaagtgaaaggcaaaaagagacaactggaacagaagatc
agttccaaacaggacagtctgaggcagatggagcagaatgtcattgacctgcagacgatt
gaagagaagactaaagagaaagttgcagctgtcaatcagcagaaagtttccctagtcgca
gggattatggagcaaattaagctgaaggtcaagctgaccatggagaaggtgtacctgact
ctggagacggtggggctgatggcgcagaagagcaagatggagaatgattgtcgagaaagc
gcctctgaactccagaccactgatcaaaaatgcatccgtctggagcaaaggaaggttcag
ctgacagaacagtgcaaaggcctgatgaagaaagccaagtccatctgcaggatgcagcat
gacgagtccttaccggaagagctgcgtaaagctttcagtaaactgcctgacacgctggac
gatatcgacaccatgctgaacgaggagcggtccagagcggagtgcttcactgggctcagt
gaaaatattgtggatgagtacaaaaagagagagcaggagaacaaagatctggagaaagag
ctggaagataagagcaatgccctgacctcataccgacagaacatatcagaggctaaggag
cgctggctgaaccctctgaagcagctggtggaacagattaatgtgaagtttagtgatttc
ttccgctccatgcaatgtgcaggagaggttgatctgcactcagagaacgaggaggagtac
gacaagtatgggatcagaatccgtgtgaagttccacagcagcactcagctccacgagctg
acggcgtaccatcagagcggaggagagcgcagcgtctccaccatgctgtacctcatggcc
ctgcaggagctcaaccgctgccccttcagggtggtggacgagatcaaccagggaatggat
cctgtaaatgagagaagagtctttgacattgtggtccgcacggcctgcaaagagacgaca
tcgcagtactttttcattacacccaaactgttgccgaatcttaaatacgcagatgagatg
actgtcctttgtgtccataacggcagccagatgctctctcccaacctatgggacgagaag
gctttcatcaggcgcagtctcagacgacaagttaagccatga
DBGET
integrated database retrieval system
