Pseudochaenichthys georgianus (South Georgia icefish): 117450974
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Entry
117450974 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Motif
Pfam:
FIIND
NACHT
NLRC4_HD2
FISNA
NOD2_WH
LRR_6
CARD
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_10
zf-RING_5
DUF577
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117450974
NCBI-ProteinID:
XP_033944927
LinkDB
All DBs
Position
1:45337034..45389895
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AA seq
1384 aa
AA seq
DB search
MSDLKDEEEDKSPVSSCLSLKSDWSKEDPINFSNAPGPSDTKRKRKSRVPVEEQLSCCAV
CQDVLKDPVSTSCGHWFCRQCITSHWEQQPPSGDPSCPQCGRRPRSRAGLQTASQSRTVQ
TDGGLQEVLDEHRLSLRRRCERVTEGTDQSETLLNRIFTELYITQGQSEEVNTQHEVRQL
EAASKKETLHDTPIKCQDIFKASPDQHIRAVLTNGVAGVGKTFSVQKFTLDWAEGLGNQD
VRLVIPLSFRELNLIKGEQYSLLRLLHVFHPTLQKVTAEQLAVCKVLLIFDGLDESRLSL
DFRNSEVVSEVSRPSSVNVLLTNLIRGKLLPSALVWITSRPAAANQIPPGCVDRVTEVRG
FTDAQKEEYFRRRSSDEGLSSRIISHIKSSRSLHIMCMIPVFCWITAAVLDHMLTTDQRG
ELPQTLTDMYSHFLLVQTKRKKQKYEEGHETSPQQLLEADRELLLKLGRLAFEHLEKGNI
MFYQEDLQRCGLDVTEALVHSGVCTEIFKRESVIFQKTVYCFVHLSIQEFLAAVYVFHCY
TNRNTEVLQDFLQGDYSNRYSRDQDYPPLDVFLMEAMEKSLQSKNGHLDLXVRFLHGLSL
ESXQRLLAGLLGRTDNRAETIQRAIRNLKEMNCYAMSPDRSINVFHCLTEMKDHAVYQEI
TEFLKSENRSEKLSEIHCSALAFMLQMSEEVLDELDLTNYKTSDEGRHRLIPAVRNCKKA
KLYGCTISKTECEVVASALKADPSHLRDLDLSHNKQMDSGVELLCSGLKSPNCRTEGSRV
ICGTASCQRSAVRALISALTCNPSHLRDLDLSGNDLKDAGVKLLRDLLESPDCRLETLRL
TRCGLSESSCASLASALTSNPSHLRELDLSENTVQDAGVKLLRDLLESPHCRLETLRLTR
CGLSESSCASLASALTSNPSHLRELDLSENTVQDAGVKLLRDLLESPHCRLETLRINNET
IRAKIQKTCDSSVEQEVKTDRTAPESFSPEHTTGSLYSFRCPGPGVFQCASTGLVFVMAQ
EAELQYRTVPWDESLLQSAGKKAAGPLFDVKSSDEAAVCQLHLPHSETADALLLDGLLSV
VHISDEGLSILEPLEATHTHVVLKVPHLSLFGLVIDTFKWLLKRRIKGQILVFLRTPSGE
EQTLDVHLLQNNVPVEEVADRHKRAVHITNSSDCELDIHHSYSVHCEPEGFYIQPESKTF
DSSFGPNYHPTFQVSLTTRTERVVLKVQDQGGHEVWYCRASLEDPRHELSQRHVPAEGRV
PAEGRVPAEGRVPAEGRVPAEGRVPAEGRVPAEGRVPADQWLRSVRTEFIQRVTPTVLKD
LLDKLFESGVITDSEMTSARTKPQYDGAREVLDAVRNKGAAASRVLINALRELDPYLYEE
LDSS
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttaaaagatgaggaagaggacaaatctccagtctccagctgtctgtctctg
aagagtgactggtctaaagaggatcctataaacttcagtaatgcacctggaccctcggac
acaaaaaggaagaggaaaagtcgtgttcctgtggaggagcagctgtcctgctgtgctgtg
tgtcaggacgtcctgaaggatccagtctcgaccagctgtggacactggttctgcagacag
tgcatcacctcacactgggagcagcaacctccatcaggagacccctcctgtccccagtgt
gggagaagacccagatccagagctggcctgcagacagccagtcagagcagaactgtacaa
acggatggtggtctgcaggaggttctcgatgaacacaggctcagtctgaggaggagatgt
gaacgtgtgactgaaggaactgatcaaagtgaaaccctcctcaacaggatcttcactgag
ctctacatcacacaaggccagagtgaagaggtgaatacccaacacgaggtgaggcagctg
gaggccgcttccaagaaagagaccctccatgacactccaatcaagtgccaggacatcttt
aaagcctcacctgaccaacacatcagagcggtcctgaccaacggagtcgctggagttgga
aaaaccttctcagtgcagaagttcactctggactgggccgagggtttgggaaaccaggat
gtccgtctggtgatcccgctctccttcagggagctgaacctgatcaaaggtgagcagtac
agtcttctccggctgctccatgtcttccatccgaccttacagaaggtcacagcagagcag
ctggctgtctgcaaagtgctgctcatctttgacggcctggatgaaagcagactttctctg
gacttcagaaacagtgaggttgtgtctgaggtctctcggccgtcctcagtcaacgtgctg
ctgactaacctcatcagggggaagctgcttccctcggctctcgtctggataacttcccga
cctgcagcggccaatcagatccctcctgggtgtgtggacagggtgacagaagtacgaggc
ttcactgacgcccagaaggaggagtacttcaggaggagatcgagtgatgaaggcctgtcc
agcagaatcatctctcacatcaagagctccaggagcctccacatcatgtgcatgatccca
gtcttctgctggatcactgctgcagttctggaccacatgctgactacagaccagagagga
gagctgccccagaccctcactgacatgtactcacacttcctgctggtccagaccaagagg
aagaagcagaagtatgaagagggacatgagacgagtccacagcagctgctggaggctgac
agggagcttctcctgaagctggggaggctggcgtttgaacatctggagaaaggaaatatc
atgttctaccaagaagacctgcagcgctgtggccttgacgtcaccgaggccttggtgcac
tcaggagtttgtacagagatcttcaaaagagagagtgtgatcttccagaaaacagtctac
tgctttgttcatctgagcattcaggagttcctggctgcagtctacgtgttccactgttac
accaacaggaacacagaggtactgcaggacttcctgcagggagactatagcaacaggtat
agcagagatcaggattacccacccctggatgtcttcctaatggaagccatggagaaatcc
ctccaaagtaaaaatggccacctggacctgnttgtccgcttcctccacggcctctctctg
gagtccnaccagagactcttagcaggcctgctgggtcgcacagacaacagagcagaaacc
atccagagagccatcagaaacctgaaggagatgaactgttatgcaatgtctcctgacagg
agcatcaacgtcttccactgcctgacagagatgaaggaccacgcagtctatcaggagatc
acagagttcctgaagtcagagaacagatcagagaaactctctgagatccactgctctgct
ctggccttcatgctgcagatgtcggaggaggttctggacgagttggacctgacaaactac
aaaacatcagacgagggacgacataggctgattccagctgtgaggaactgcaaaaaagcc
aagctttatggctgtacaatctcaaagactgaatgtgaagtggtggcctcggctctgaag
gccgacccctcccacctgagagatctggacctgagtcacaacaaacagatggattcagga
gtggagctgctgtgctctggactaaagagtccaaactgcaggactgaaggctctcgggtc
atctgtggaactgcaagttgtcagagatcagctgtgcgggctctgatctcagctctgacg
tgcaacccctcccatctgagagatctggacctgagtggcaacgatctgaaggatgcagga
gtgaagctgctgagagatcttctggagagtccagactgcagactggagactctcagactg
acgcgctgcgggttgtcagagagtagctgtgcttctctggcctcagctctgacgtccaac
ccctcccatctgagagagctggacctgagtgagaacacggtgcaggatgcaggagtgaag
ctgctgagagatcttctggagagtccacactgcagactggagactctcagactgacgcgc
tgcgggttgtcagagagtagctgtgcttctctggcctcagctctgacgtccaacccctcc
catctgagagagctggacctgagtgagaacacggtgcaggatgcaggagtgaagctgctg
agagatcttctggagagtccacactgcagactggagactctcaggatcaataacgagacg
atcagagccaagatccagaagacctgtgactccagtgtggaacaggaagtgaagacggac
agaacggctcctgaatccttctcacctgaacacacaactggatctttatacagcttcagg
tgtcctggtccaggtgtgttccagtgtgcttcgactggcctggtgttcgtcatggctcag
gaggcagagcttcagtacaggacggtcccttgggatgagagcctcctccaatcagctggc
aagaaggcagcagggccgctgttcgacgtgaagagttctgatgaagctgccgtctgccag
ctccacctgccacacagtgagacagcggatgcgctgctcctggacggcctgttgtctgtc
gtccacatctctgatgaaggcctgagcatcctggagccgctggaggccacacacactcac
gtggtgctgaaggtgcctcacctctctctcttcggcctcgtcatcgatacatttaaatgg
cttctaaagaggcggataaagggccaaattctggtgtttctacgaaccccgtccggagag
gagcaaaccctggatgtacatctgctgcagaacaacgtccctgtggaggaggttgctgac
agacacaaacgtgctgtgcacatcacaaactcctccgactgtgagctggacatccatcac
agttacagcgtgcactgtgagcctgagggcttctacatccagccggagagtaaaaccttt
gattccagctttggaccaaactaccatccgacatttcaagtttccctgacgacgagaaca
gagagagtggttttgaaggtccaggaccaagggggacatgaagtctggtattgtcgcgcg
tcactggaagatccaaggcatgaattgtcccagagacatgtcccagcagagggcagagtc
cccgcagagggcagagtccccgcagagggcagagtccccgcagagggcagagtccccgca
gagggcagagtccccgcagagggcagagtccccgcagagggcagagtcccagcagaccag
tggctgcgctcagttcggacagagttcattcaaagagtgactccaactgtcctgaaggat
cttctggataaactctttgagtctggagttatcactgattctgaaatgacgtcagccaga
accaaaccccaatatgacggagcacgagaggtgttggacgcggtgcgaaataaaggagct
gcagccagcagggttctgatcaatgctctccgtgagctggacccgtatctttacgaagag
ctcgactcgagctga
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