Pseudochaenichthys georgianus (South Georgia icefish): 117457259
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Entry
117457259 CDS
T09629
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117457259 (trpc6b)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117457259 (trpc6b)
BRITE hierarchy
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank_4
Ank
Ank_5
RpoY
Motif
Other DBs
NCBI-GeneID:
117457259
NCBI-ProteinID:
XP_033953114
EnsemblRapid:
ENSPGEG00000010260
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All DBs
Position
13:complement(14672512..14685114)
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AA seq
860 aa
AA seq
DB search
MMRKSSSTNKQGILRNSGRRSNDQRAMTMQHVVHKPRKQVLRGAGYLYRAESSFCLSMAE
ELFLDAAEYGNIPEVRRMLEEQPDLNINCVNYMGQNALQLAVANEHFEVTKLLLRRKDLA
RIGDALLLAISKGYIRIVEALLGHEAFADGQRLTNSPSQVDPHDDFFAYDEDGTRFSHDI
TPIILASQCHEYEIVHILLMKGSRVERPHDYFCQCRTCSEHQRHDSFRHSQSRINAYKCL
ASPAYLSLSNEDPVMAALEMSNELEVLSNIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTE
EVKAILNGDTESCPSPETLGRQNLIRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLR
QQTTAVKILLVLGVAFGLPILSFLYWIAPSSKLGKLMRGPFLKFVAHAASFMIFLCLLVL
NAADRFGGTSLLPNMTTHDHPSQLFRMKTTPFTWMEILIISWVIGKIWKECKDIWSQDIR
EYISEPWNLLDFSILAIFMTSFIARLMAFWHAYSAQCYVDKHYTDLSNMTLPFEIQYFQL
ARINWMPSDPQLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDLFKFMVIF
ITVFLAFMVGMFNLYSYYLGAKYNDAFTTLEESFKTLFWAIFGLSEVKSVVINIDHKFIE
NIGYVLYGVYNIIMVIVLLNMLIAMFNSSFQEIEDDSDVEWKFARAKLWFSYFEHGGTLS
VPFNLVPSPKSVLSLLLGIRELLWDGPKGKGNSNDEMELNKLRQQSDLSVDASLCPTRHQ
SIMNRLVKRYIVKAQRDKENDEINEGELKEIKQDISSLRYELLERANQDVETVTKLIRQL
GEVMHVQQKEEQKNDISFIY
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggaagagcagcagcacaaataaacaagggattctcagaaactcaggcaggcgg
agcaatgatcagagagccatgacgatgcagcatgtcgtgcacaaaccccggaagcaggta
ttacggggagctggttacctgtatcgtgcagagtcctccttctgcctttccatggcagag
gagcttttcttagatgctgcagaatatggaaatattcctgaagtgaggcggatgttagag
gagcagccagatctcaacatcaactgtgtgaactacatgggccagaatgcattgcagcta
gcagttgcaaatgagcattttgaagtcactaagctcctgctaaggaggaaagacctggct
cgaattggagatgctctactgttagccatcagtaaaggctacatccgtatagtggaagct
ttactgggccatgaggcctttgcagacggacagaggctgaccaacagtcccagccaggtg
gacccacatgatgacttcttcgcctatgatgaggatggcacacgtttctctcatgacatc
acccccatcatactggcttcccagtgccacgagtatgaaattgtgcatatacttcttatg
aagggatcccgtgtagaacgcccccatgactacttctgccagtgtaggacctgcagcgag
catcagaggcacgactcattcagacattcacaatcacgcatcaatgcatataaatgtctg
gccagtcctgcttatctgtccctctccaatgaagacccggtgatggcggctttggagatg
agcaatgagcttgaagttctatccaatattgagaaggagtttaagaatgattacaagaag
ctatccatgcagtgtaaagattttgtggtgggactgctggatttgtgtcgaaacacagag
gaagtgaaggccatcttaaacggggacactgaatcatgtccaagcccagagaccttgggc
agacaaaacctaatcaggttaaaacttgcaataaagtatgaagttaaaaagtttgtggca
catccaaactgccaacagcaactcctctctatctggtacgagaacttgtccggattacgt
cagcagaccacagcagttaaaatccttctggttcttggtgtagcgtttggactgccaatc
ctgtcctttttgtattggatagcaccatcaagtaagttagggaaactcatgcgtggacct
ttcctgaagttcgtggcccatgcagcctcctttatgatatttctttgcctgctggtcctg
aacgcagcagaccgctttgggggaacatcactgctgcccaacatgaccacccacgatcac
ccctctcaactgtttcgtatgaagaccacccccttcacctggatggagattctcatcata
tcctgggtcataggaaagatctggaaagaatgtaaagatatttggtcgcaggacatcagg
gaatacatctcagagccctggaaccttcttgactttagtatcttggccatttttatgaca
tctttcattgccagattaatggctttctggcatgcatattctgcccagtgttatgttgac
aagcactacactgacctgtccaacatgaccttgccatttgagatacagtatttccagctg
gctcgtatcaactggatgccatcggacccacagcttatctctgaaggcctctatgcaatt
gcagttgtgctgagtttctctcgcattgcatacatcctacctgccaacgagagctttggg
cctttacagatctctttaggaagaacagttaaagacctctttaagttcatggtgatcttc
ataacagtctttctggctttcatggtgggaatgttcaatctgtactcgtactacctcggg
gccaaatacaacgatgccttcacaacgctcgaagagagttttaaaacgctattttgggcc
atctttggcttgtcagaagtaaaatcagtggtcatcaacatcgaccataaattcattgag
aatattggctatgttctgtatggggtgtacaacatcatcatggtgattgtgttgctgaat
atgctcattgccatgttcaacagctccttccaagaaattgaggatgattctgatgttgag
tggaagtttgccagagctaagctgtggttctcgtactttgagcacggcggcaccctgtcc
gtgcccttcaacctcgtacccagccccaagtctgtcctttccctcttgcttgggataagg
gaacttctttgggatggacctaaaggcaaaggaaattcaaatgatgagatggagcttaat
aagttgaggcagcagtcagatctgagtgtggatgcatcgctttgtccaacgcgtcaccaa
agtataatgaatcgcctcgtcaaaagatacatagtaaaagcacagcgagataaagaaaat
gacgaaattaatgaaggtgagctgaaagaaatcaaacaggacatctccagtctccgctat
gagctgctggaaagggccaaccaggacgtggagacagtgacaaaactcatcaggcaactg
ggagaagtcatgcatgttcagcagaaagaagagcagaagaatgatatctctttcatttat
taa
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