Pseudochaenichthys georgianus (South Georgia icefish): 117458142
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Entry
117458142 CDS
T09629
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117458142 (rnft1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117458142 (rnft1)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117458142 (rnft1)
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-ANAPC11
Prok-RING_4
zf-RING_6
zf-C3HC4_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
117458142
NCBI-ProteinID:
XP_033954305
EnsemblRapid:
ENSPGEG00000023884
LinkDB
All DBs
Position
14:26294135..26299378
Genome browser
AA seq
419 aa
AA seq
DB search
MKLRDQNDRPDSRRALKLRYSPAVMQPNSSEGNGLSLNLQPEPTRPPAPGAAAASPESNE
VRVNMTSKPGESGGGASSRRSRVNSYSHTHSQPHSHNRGPHHSNPESELDPPDSDLDSGE
PSSSFSELRCLFRWLQKSLPFLVIICAKLVVQHALGLAVGVGLFTTFLYVNKNIQTQVFL
QDRHSKLQCVWLLVFLTSSTLLLYYTFLSETLHYCLIFLSPTIEPLGFWEVLWTVGITNF
IIKFLFMGMKCLILLIPSSLVNYKTQGRWVMLSEELGQAHQATAPVPLWFRYLVTYQEVD
GTPGLTLGVLLALLYLIMKLLGLYGQWTSILKTVRVFLNGEHTGTAATRSQCSETGDVCP
ICQGEYRDPRVLLCQHIFCDDCIALWFNREKSCPLCRTVITEKVYKWRDGATSPHLQIY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccgggatcagaatgacaggcctgattccagaagagcactgaaactgaggtat
tcccctgctgtaatgcagcctaattcaagtgaaggaaatggtttatccttgaacctgcag
ccagagcccaccaggcctccagcccccggggcggctgctgccagccctgagagcaacgag
gtgcgggtaaatatgaccagcaagccgggagagagcggtggaggcgcgtcatccaggagg
tctagggtcaactcctacagccacacacactctcagccgcactcacacaaccggggaccg
caccactccaatccagagtccgagttggacccgccggactctgatttggactcaggagaa
cccagctcctccttttctgagctccggtgtctcttccgctggcttcaaaagagtcttcct
tttctcgtcatcatttgtgctaaactggtcgtccaacatgctcttgggctagcagttggg
gttggactcttcacaacttttctatatgtgaataaaaacattcaaactcaagtatttctt
caggatcgccactccaagctgcagtgtgtctggctgctagtgttcctgacctcctccacc
ctcctgctttactacacctttctcagtgagacactccactattgcctcatcttcctcagc
cccaccatcgagccgctgggtttctgggaggttctgtggaccgtcggcatcaccaacttc
ataataaagtttctctttatggggatgaagtgccttatcctgctgataccgtcctcactg
gtgaactataaaacccagggccggtgggtgatgctgagcgaggagctgggtcaggcccac
caggccacggctcctgtcccgctgtggttccgctacctggtcacctaccaggaggtggac
ggcacccccggcctcacactgggagtcctgctggctttgctctacctcataatgaagctt
ttaggattgtacggacagtggacgtccatactgaaaactgtgagggtctttctaaatggc
gagcatacaggcacagcagccactaggagtcagtgcagcgagaccggagacgtgtgtccc
atctgtcagggcgagtaccgggacccccgggtgctgctctgtcagcacatcttctgtgat
gactgcatcgcgctgtggttcaaccgggagaagagctgccctctgtgccgcaccgtcatc
actgagaaggtctacaagtggagggacggagccacatctccacacctgcagatttattaa
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