Pseudochaenichthys georgianus (South Georgia icefish): 117458755
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Entry
117458755 CDS
T09629
Symbol
vtnb
Name
(RefSeq) vitronectin b
KO
K06251
vitronectin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117458755 (vtnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117458755 (vtnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117458755 (vtnb)
00536 Glycosaminoglycan binding proteins [BR:
pgeo00536
]
117458755 (vtnb)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117458755 (vtnb)
Glycosaminoglycan binding proteins [BR:
pgeo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117458755 (vtnb)
BRITE hierarchy
Motif
Pfam:
Hemopexin
Somatomedin_B
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
117458755
NCBI-ProteinID:
XP_033955295
EnsemblRapid:
ENSPGEG00000010383
LinkDB
All DBs
Position
14:complement(15491365..15495751)
Genome browser
AA seq
453 aa
AA seq
DB search
MKPAVALLGLVLLLDATFSAEESCVGRCGIFNLLTKCQCDSMCVYYGSCCGDFDNICPKK
VARGDTFEETDGVTETVTTTMIESTPKDLPPTFNTIAETTTAYPQPPTTQGPQTTQGPTP
PVDPDPAVCSGEPFDAFLQLKNGSIYAFRGEYFFELDNTSVLPGYPKLIEDVWGMSGPID
AAFTRINCQGKSYIFKGNKYWRFDGDVLDDDYPRDISVGFDAIPDDVHAAFAIPAPSHRG
KEKTYFFKGDKYYQYEFKHQPSHEECVQMSRSSPSVLFSRYTDLFCDQTLEDLFLELFGS
SFSSPHTGPRYTSRDWQGIRAPVDAAMVGRVYISPVPTPPPARRRSSRRRRPSKKRAQRR
RLSRQALFDDFWGFDDLYDYSDVSDIFEESTTQEDKSTPVQNVYFFKRDKYYRVDLQTKR
VDSASPPYPRSIAKYWLGCKSEETPDASRAEKR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagcagtggctctactgggtctcgtcctcctgctggacgccaccttttctgca
gaagagtcctgtgttggtcgctgtggcatcttcaacctgctgacaaaatgtcagtgtgac
tccatgtgtgtgtactatggaagctgctgtggagactttgacaatatctgccctaaaaaa
gttgctcgtggcgatactttcgaagaaacagatggagtaacagaaacagtgacgacgact
atgatcgagagcacaccaaaagatctaccaccaactttcaacacaatcgcagaaaccacc
actgcctatccccagccccctaccacacaaggaccccagaccacacaagggcccactcca
cctgtagaccctgacccagctgtctgcagcggtgaaccttttgatgctttcctgcagctg
aagaatgggtcgatatatgcatttagaggtgaatatttcttcgagttggataatacgtcc
gttcttcctgggtacccaaaactcattgaggatgtgtgggggatgtcaggacccatagac
gctgcattcacacgcatcaactgccagggaaaatcctacatcttcaaggggaacaagtac
tggaggtttgacggtgatgtcttggatgacgactatcctcgggacatttcagtcggcttt
gatgccataccagatgacgttcatgctgcgtttgccataccagcaccgagtcaccgtggc
aaagagaaaacctactttttcaaaggggacaagtattaccagtatgagttcaagcaccag
ccttcccatgaggagtgcgtccagatgagcaggtcctctccgtctgtgctgttctcacga
tacaccgacctcttctgcgatcagacattggaggatttattcttagagctctttggaagc
tccttcagcagtcctcacacaggccctcgttacaccagcagggactggcagggcatcagg
gcccctgtagatgctgccatggtgggacgagtgtacatcagtcccgtgcctacacctcca
ccagcaaggaggcgcagcagcaggaggaggaggcccagcaagaagcgtgcgcagcgaaga
aggctgagtcgccaagcgttgttcgatgatttctggggattcgatgatttgtatgactac
agcgatgtcagcgatatttttgaggagagcaccacacaggaggacaaaagcacccctgtt
caaaatgtttatttcttcaagagagataaatactacagagtggacctgcagacaaaacgt
gtggactctgccagccctccttacccacgatccattgcgaaatactggctgggctgcaag
agtgaagagacacctgatgcatcgagagcagagaagagatag
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