Pseudochaenichthys georgianus (South Georgia icefish): 117460236
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Entry
117460236 CDS
T09629
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117460236
NCBI-ProteinID:
XP_033957408
EnsemblRapid:
ENSPGEG00000024248
LinkDB
All DBs
Position
16:29487398..29509283
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AA seq
1555 aa
AA seq
DB search
MDGVSGGVGTPSSGGGSGCDSLPRRTRGDSKRRSKGSLPSPGYRLSQASLEGERGCFGGD
STSSGGRARRLSIMSSSNRDGLSFRTAGTPTTPVPLPPPPSSSSAHPPPRSVGFAASRAA
LPSTSSTGTGVMVVATGPETTTTTTCNTTAAGTPDLMGQCGLGGFGLGLDGEDYSTSNQS
TFIQRQFGAMLQPGVNKFSLRMFGSHKAVALEQQRLKSAGSWIIHPYSDFRFYWDLLMLM
LMMGNLIILPVGITFFREENTPSWIIFNVVSDTLFMVDLVLNFRTGIIKEDNTEILLDPR
AIRQKYLKNWFLVDFVSSIPVDYIFLMVDSLDSEVYRTARALRIVRFTKILSLLRLLRLS
RLIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVS
KNLMVNDSWGLQYSYALFKAMSHMLCIGYGAQAPEGMTDVWLTMLSMIVGATCYAMFIGH
ATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADVRQKIHEYYEHRFQGKMFDEENILGE
LSDPLKEEIVSFNCRSLVANMPLFANADPNFVTAVLIKLRFEVFQPSDFIIREGTVGRKM
YFIQHGRVGVLTRGNKETKLSDGSYFGEICLLTHGRRTASVRADTYCRLYSLSVDNFNEV
LEEHPMMRRAFETVAVDRLDRIGRKNSMLLRKSSQGGSLGGSMGRGGRGGGGPGARGGMG
SCDSMLVQQIVKHDSMPAMQDAIAAAAAGRSGVMGKSGSVSPRPRPVIWAPLVNAPLQAA
AATSNVAIALMHQQQQQQQLQQLQQQHALGGAFFLPSPLVSPSPSSTFSLSTPRPPVLQP
LRPSVSSLIGMMTLGGMGGMGGLSPRGFPASPSTMGPPGGLTSPPIAKTPPIPASSVPAS
VQPGRTLHTSLRLQADHHSMIAGSLGTPTGGGTLTPPLHKVPAANLPAAYRAPSDGNTFM
MGHQGAKEALLRHGGTSSQGLPALGRLTQEARLLSASQPTLPHRSWVGVQPHPPLHRKAS
GGNLLAAPFLAGQLARGGSAGMLTSNTPVQLVTHIPFNAHTHAQAAFPIQPALAQYLPTQ
AAPHSTSVPSAAHKPAAPLTYSSPPKQTPLSSPTPSSPTPILPPTPHPKPISMTHSGSSS
PPRSCTPPLANPLSLSSTPRPKPIPTSSPRSSSPSPSSTPPPSSVSTPIPPPQTYGPKSS
FSPPKQTPLSSPTPSSPTPILPPTPRPKPISMTHSGSFSPPRSSTPPLANPLSLSSTPRP
KPIPTSSPRSSSPSSTPPPSSVSTPIPPPQTYGPKSSFTSSSPPSSLITSIPPRPQSPRA
KVSNTPPSPSPLSGPSPAQTPIPSPILTPTQTTRTHTSTPAQTPTQTLSPTPSHSPVPVT
PVPSVSKSLSPTPCLQPSISSSARGPNQTPTQTALSAPTPASVSSPRKITFSVHPVQQTS
PVLTPSPTYVSGHSTKPIPGTTSSSSCPNSSSTKPSSLTSSGIHCASSPVLKQISTPTAA
PTHSTKLITPSIPAAQASTTSSTQSAHAAPLAKATTPKGGKKDPLHSLPEKTKRN
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtgtctggaggtgtgggtactcccagtagtggcgggggttcagggtgtgac
agcctccccaggcgtaccagaggggactcgaagcggcgcagtaagggcagcctgccctcc
ccggggtacaggctgtcccaggcctccctggagggggagaggggctgcttcgggggggac
agcacttcctcaggtggacgcgctcgtcgcctctccatcatgagctcctccaacagggac
ggactttccttccgcacagctggcaccccaaccaccccggtgccccttcctcccccgccc
tcttcctcctcagcccatcctccacctcgctcagtgggctttgccgcctcccgtgccgcc
ctgccctccacctcttcaaccgggaccggagtgatggtggtggccaccggcccagagacc
accaccaccaccacgtgcaacaccactgcagcagggacccctgacttgatggggcagtgt
ggactgggtgggtttggcttgggcctggatggggaggactacagcacctccaaccagagc
accttcatccagagacagtttggagccatgctgcagcccggggtcaacaagttcagtctg
cgcatgtttgggtcccacaaagctgtggcactggagcagcagagactgaaatcagcaggg
tcctggatcatacacccttacagtgacttcagattctactgggacctgttgatgctgatg
ttgatgatggggaacttaatcatcctgccagtgggcatcactttttttagagaggagaac
actccctcgtggatcatcttcaacgtcgtctccgacactctcttcatggtcgacttggtt
ctcaacttcaggaccggcatcatcaaagaggacaacactgagatattgctggaccccagg
gcgattcgccagaaatatctgaagaactggttcctcgtggactttgtgtcctccatcccg
gtggactacatctttctgatggtggacagtctggactccgaggtctacaggacggccagg
gcgctgcgcatcgtccgcttcaccaaaatcctgagcctgcttcgactgctccgcctgtcc
cgactcatccgctacatccatcagtgggaggagatcttccatatgacctatgaccttgcc
agtgccatggtgaggatcgtgaatctgatcgggatgatgctgctgctgtgccactgggat
ggctgtctgcagttcctcgtccccatgctgcaggacttccctcctgactgctgggtttcc
aagaatctgatggtgaatgactcatggggcctccagtactcctatgctctattcaaagcc
atgagccacatgttgtgtattgggtacggagcacaggctccagaagggatgactgatgtg
tggctcaccatgctcagcatgatcgtaggggccacctgctacgccatgttcatcggacac
gccaccgctctcatccagtctctggactcctcgcggcgacagtaccaagaaaagtacaag
caggtggagcagtacatgtcgttccataaacttcctgcagatgtgcgtcaaaagatccac
gaatactatgagcaccgcttccaggggaagatgtttgacgaggagaacatccttggagaa
ctcagcgacccactgaaagaggagatagtcagctttaactgccggagcctggtggctaac
atgccgctatttgccaacgccgatcccaactttgtgacagcagtgctgatcaagctccgc
tttgaagtgtttcagccttcagacttcattatccgcgagggcacagtgggacggaagatg
tatttcatccagcatgggcgagttggtgtgctgacccgtggcaacaaagaaaccaagctg
agtgatggctcttactttggagagatctgtttgttgactcatggacggaggacagccagc
gtccgtgcagatacatactgtcgcctgtactcgctcagtgtggacaactttaacgaggtg
ctggaggaacatcccatgatgcgtcgtgcctttgaaactgtcgctgttgacagattggac
cgaatcggcaggaagaactctatgcttctgcggaagtcgtcgcagggcggttctctgggg
ggcagtatgggtcgtggaggccggggtggaggaggtccaggagccaggggaggtatgggc
tcctgtgacagcatgctggtgcagcagattgtcaaacacgacagcatgccggcgatgcag
gatgccattgcggccgctgctgcaggaagaagcggagtcatgggaaaaagtggctcggtg
tctcctcggccgcgcccggtcatctgggctccgctggtcaacgcccccctgcaggcggct
gctgccaccagtaatgtagccatcgccctcatgcaccagcagcaacagcaacagcagctg
cagcagctgcagcagcagcatgcactgggaggggctttcttcttgccttcacctcttgtg
tctccctctccgtcctctaccttttctttgtctacccctcgtcctcctgtgttacagccc
ctccgcccgtctgtgagctctctaatcggcatgatgacactgggagggatgggaggaatg
ggtggtttgtcccccagaggatttcccgcctctccctcgaccatgggccctcctggtggg
ttgacctcacccccgattgccaaaactccacccataccagcatcctctgtcccagcatct
gtccaaccaggcaggactcttcataccagcctccgcctccaggctgatcatcactcaatg
attgctggatcactaggaaccccgacaggtggagggacactgactccacctctccataaa
gtacctgccgccaaccttcctgctgcttatagagccccgtcagatggcaacacttttatg
atgggccaccagggggcaaaggaagctttgttacgtcatggtggaaccagctctcagggt
ctgccggcgctgggcagactcacccaggaggccaggctgctgtcggcctcacagcccacc
ctgcctcaccgctcctgggttggagtgcagcctcacccccctctccacaggaaggcctct
ggtggtaatttgctggcggctcctttcctggcagggcagttagccaggggaggcagtgca
ggcatgctgacctcaaacactccagtacagctagtgacacatattccatttaacgcacac
acacacgctcaggccgcatttcctattcagcctgccttagcacagtatctgcccacacag
gctgcccctcacagcacctctgtaccttcagccgcacacaagcctgcagctcccctaaca
tattcctcccctccaaagcagacccctctctcttctcccaccccctcttctcctacacct
atactccctcctacaccgcaccctaaaccaatctcaatgacacactctggctcctcctct
cctcctcgcagctgcacccctcctttagcaaacccgctgtcgctctcctcaactcctcgt
cccaaaccaattcctacatcttctccccgctcgtcctctccctctccctcctccacaccg
cccccatcttctgtttctacccctatcccaccacctcaaacctatgggccaaagtcatct
ttctcccctccaaagcagacccctctctcttctcccaccccctcttctcctacacctata
ctccctcctacaccgcgccctaaaccaatctcaatgacacactctggctccttctctcct
cctcgcagctcgacccctcctttagcaaacccgctgtcgctctcctcaactcctcgtccc
aaaccaattcctacatcttctccccgctcgtcctctccctcctccacaccgcccccatct
tctgtttctacccctatcccaccacctcaaacctatgggccaaagtcatctttcacctcc
tcctctcccccatcctccttaatcacctctatcccacctcgtccccagagcccccgagcc
aaggtgtccaacacgcctccttctccttctccattgtctggcccaagtcccgcacaaact
ccaatcccttccccgatactaacacccactcagaccacccgtacacacacttctacccct
gcccaaacacctacacagacccttagtcctactccttcccattctccggttcctgtgaca
cctgtcccctctgtaagtaaatccctgagtccaactccttgtctccagccctcaatctcc
agctcagctagaggccccaaccagaccccaacacaaactgcattgtctgccccgacacca
gctagtgttagctctccacgtaaaataactttctcagttcatcctgtgcagcaaacctct
cctgtccttactccaagcccaacttatgtatctggtcattcgaccaaaccaatcccgggg
acaacatcatcctcatcgtgtccaaactcgagctccactaagccttcatctctgacctcc
tctggtatccattgtgcctcttctcccgtcctaaaacaaatatcaaccccaacagctgcc
cctacccactccacaaaactcattaccccctctattcctgccgctcaggcttccaccacc
tcatccacccagtcagcacatgcagccccccttgcaaaggccactactcctaaaggtggg
aaaaaagaccctctgcattcattgcctgaaaagactaagaggaactaa
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