Pseudochaenichthys georgianus (South Georgia icefish): 117466220
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Entry
117466220 CDS
T09629
Symbol
rnf17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117466220 (rnf17)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117466220 (rnf17)
BRITE hierarchy
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-C3HC4
zf-RING_5
Sec3_CC
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
117466220
NCBI-ProteinID:
XP_033965246
EnsemblRapid:
ENSPGEG00000021443
LinkDB
All DBs
Position
21:complement(36019946..36074114)
Genome browser
AA seq
1599 aa
AA seq
DB search
MIKRGDNPSAEMCTLCEEAFTLPEDEVEGNLPRVLLCSHIYCTSCLLSIQSDDVIKCPEC
KVDSTLPEGGVFGLKEDSGIIGLIYTSKLNRKSRRSSYRKKDESSPLKDINTNTEDVEQS
TDIEKIRTAVDEALVQAAENHALLDKINETLKTGLTDQVKRDRARLESEITQAADKASQA
IQKWKDEQISELTKLNARFSTGRVELCRVQKKMKALEIAMQMAREVRRVPFLEQYCTLDK
VLETLQAPVDEQSFDVKCITLGSGLSSVFQIDCLKPSLALSLAIEVGDPKLLSEPPSSFN
RKSSLQRAEGQDRNYNFPSGNDLPTHPKQNQESPKSRSPLSRGSSPIPLGSSNRPRQNDT
SHSIDPDVIIEELYKQQQHAPQPTGPELASDVGRIQRKKINQSFGNQADFLQMVIVTHIV
NPSHFYVRYEAENSESENLSEKINVFCSRDSCHFTSSDKVENGSLIFAKSKEGLWCRASV
VSVLQIGRADAGKDCPVTQLASVRVFFLDSGLNIRLPIQREEGSTESSLQEVNTQLRKVY
EGVNRVLSNFAPQAIRCSLKDLVPYDLTKGWEKDAQVKFSRMVGSAAVDMRHKGQDRDTL
LVDLNKVPVNQSSGNPISVREYLVLNEVARYYAPVNLGMRTLLFYPPEYPKVDTEVNAVV
SHINTPTDFYIQVVENMESLLLFAKLQDCYNATMMSGDEDFNIYCPVMEQSCVARFKGKL
WYRAQIIGNPAGKKVEVQYVDFGIKKILSVSDLRKIKDEFFALPSMAIHCCLSEIIPLDG
NTWSETCCNRFVSLAQDKLVTIVATGQPGSQPLPVKLFESSLNGPEANIATLLVKEELAS
FKDRSAPCRPKSLQETRGSSAEDSTDAIWDSPLELGLDTESVDTPEQKTPGDQTEEQPEF
DAQLKLPDQLKDLKVRVSHVNSPSSFYIQLTQNDAQLKKICELVKKQCARMDAEDIMWKA
DIYCAAQIDGVWERGQICSDVESDNIAEVLRCDHGNKVKIQISDLRPLRPSLTGALALEC
TLTDIRPAGGRSTWTATACDLISFYLAGASAMVTIKKLTDEHPVPVILSCSNKTGRFVSI
ADFLVSEGLALRERKPRDVVVKKSEIKETEAPPPVSETQTKGSDVKGINTPPALPPSPLF
FAATPISITTSPRPNSRTVMSAEKVKTPMYNPPELPCLGNIQINVSAIGEDGLIYTRTLN
AECQLEQLRERIQQSMKTLPRQKPYTWKSVLGCAVIGPDMLWYRGQLLEVLGGHVKVQYV
DYGLVENIPVVHVYPVLLCEDVPQLCMPCKLHSINPVGGRWQRDAVALLKELLLNRCVDM
RVMELPSDPRDPLSVELFVDGLSLSRILCHHEHASMDQALSVNKEFTVMSARLLDDWDID
TEGLKGPEEPLLGPFIYPNLPQEGERIQVRVKHLWTPNELFLWPVDGADEVDGETLDEVL
TRINSDLSSLQRLGNFRQGAPCLAEYRDGKYYRAELIKITSVEPVMILVKHVDFGSDDTL
PPSKLRQMCAELMSFPSRALKVKVAGFKPPSKSRQQQQDVLPYSPAWSVKATMDMIDMLH
GNITASVVAREPELTVLLYNEDEELVHLPLVSNGLAEFE
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagaggcgataaccccagcgctgagatgtgcacgctatgtgaagaagccttt
actctacccgaggacgaagttgaaggcaacctccctcgtgtgcttttatgttcccacatc
tactgcacatcctgcctgctgtccattcaaagtgacgatgtcatcaaatgtcccgagtgt
aaggtggactccacccttcctgaaggtggggtgtttggcctgaaggaagatagcggaatc
attggcctcatctacacctctaaacttaatcggaaaagcaggagatcaagttatcgcaaa
aaggacgaatcatcaccattgaaggacattaacaccaataccgaggatgttgagcagtca
actgatattgagaagattagaacggcggtggatgaggcgttggtccaggctgcagaaaat
catgctcttcttgacaaaatcaatgagactcttaagactggtctgacggatcaggtgaag
agggacagagctcggctggagtctgagatcacgcaagctgcagacaaggcttcacaagcc
attcagaagtggaaggatgagcagatcagtgagctgacgaaattaaacgctcgattctcc
accggtagagtagaattgtgccgcgtccagaagaagatgaaggccctggagattgccatg
caaatggccagagaagtacgccgtgtcccctttctggagcagtactgcaccctggataag
gttctggagacattgcaggcccctgtggatgagcagtccttcgatgttaaatgcatcact
ctgggctctggattgagcagtgttttccagatcgattgtctgaaaccgagtctggctttg
tctctggcgattgaagtcggcgacccaaagctgttgtctgagccgccgagcagcttcaac
aggaagtcctcgctgcagcgtgcagagggccaggacagaaactataactttccctctggc
aacgacctgcccactcatccaaaacaaaaccaggagagcccgaaatctcgcagtccgtta
tcccgaggctcctctccgattccccttggcagttccaaccgtcctcgccagaacgacacg
tcgcactctatagatccagacgtaatcatcgaggagctgtacaagcaacaacaacatgct
ccccaacccaccggccctgagctggctagtgacgtagggagaatccaaaggaaaaagata
aatcagtcttttggcaatcaggcagatttcctccagatggtgattgtaacccacattgtg
aatccaagtcacttctacgtccgctacgaggcggagaacagcgaaagtgagaacctctcc
gagaagataaacgtcttctgcagcagagacagttgccactttacttccagtgacaaagtg
gagaacggctccttgatttttgcgaagtcgaaggagggtctgtggtgtcgggccagtgtg
gtttcagtcctgcagatcggacgtgctgatgcagggaaagattgtccagtcactcaactg
gccagtgtccgagtcttcttcctcgactctggcctcaacatacgcctccccatacagagg
gaggaggggagcaccgagtcttccctgcaggaggtgaacacccagctgaggaaggtgtat
gagggggtgaatcgggtgctgagtaacttcgctcctcaggccatcagatgttccctcaag
gacctggtcccctatgacctgacaaagggctgggaaaaagatgctcaggtgaaattcagc
cgtatggtgggctctgcagcggtggatatgagacataagggtcaggacagagacactctg
ctggtggacctgaataaagttcccgtcaatcagtccagtggcaatcccatctccgtcaga
gagtacctcgtcctcaacgaagtggccaggtattatgctccggtgaatttgggcatgagg
acgctgctgttctaccctcctgagtatcccaaggtcgacacagaggtcaatgctgttgtg
tcccacatcaacacccccactgacttctacatccaggtggttgagaacatggagtctttg
ctgctctttgcaaagcttcaggattgttacaatgcgacgatgatgtctggagatgaagac
ttcaacatctactgtcctgtgatggagcagtcctgcgtcgcccggttcaagggcaagctg
tggtacagagctcagatcataggtaatccggcgggcaagaaagtggaggtgcagtatgtc
gacttcggcattaaaaagattctgtcagtgagcgacttgaggaagatcaaggacgagttc
ttcgcccttccttccatggcaatccactgctgtctgtcagaaataattcctctggatgga
aacacctggagtgagacctgctgcaacagattcgtcagcctggctcaagataaactggtc
actatcgtggctacagggcaaccagggtctcagccgctgccggtcaaactgtttgagagc
agtctgaacggaccagaagccaacatcgccacactgctggtcaaagaggagctggcctcc
ttcaaagacaggtctgctccctgcagacctaaatccctgcaggagacacgtgggtcctct
gctgaagactcaactgatgccatttgggactctccacttgagctgggtttggacacagag
agcgttgacactcctgagcagaaaacccctggagatcagactgaggagcagccggagttt
gatgctcagctgaagctccccgatcaactcaaagacctgaaagtccgagtcagccacgtc
aactcgccgagcagcttctacattcagctcacccagaacgacgcccagctcaaaaagatc
tgtgagctggtgaagaagcagtgtgcgcgcatggacgccgaagatataatgtggaaggcc
gacatttactgcgctgctcagatcgacggggtttgggagagaggacagatctgctccgac
gtcgagtcagacaacatcgcagaggttctgcgctgtgaccatggcaacaaggtgaagatc
cagatcagcgacctgcggcccctccgtccctcactgacgggtgctctggcactggagtgc
actctcactgacatcaggccggcaggaggcagatccacctggacggctacagcctgcgac
ctgatctccttctacctggctggagcctcggctatggtcaccatcaagaagttgacagac
gagcatccggttcccgtcattctgtcctgctccaacaagacgggacggtttgtcagcatc
gcagactttctcgtgagcgaaggcctcgccctcagggagaggaaaccaagagatgttgtt
gttaaaaaatctgagatcaaagaaaccgaagcgccgcctccagtgagcgagacccagact
aaaggctctgatgtgaaggggataaacactcccccagctcttcctccgagtcctttgttc
ttcgcagccacccccatctccattaccactagtccaagacctaactctcgcaccgtcatg
tctgctgagaaggtgaagacaccaatgtataacccccccgagctgccatgcctcggtaac
atccagataaatgtttctgccatcggagaggacggtctcatttacaccagaacactgaat
gcagagtgtcagctggagcagctcagggagaggattcagcagagcatgaagactttaccc
agacagaagccgtacacctggaagtccgtgctgggctgcgctgtcatcgggccggacatg
ctgtggtaccgaggacaactgctggaggtgctgggtggacacgttaaggtacagtatgtg
gactacggcctggtggagaacatcccagtggttcatgtgtaccccgtgctgctgtgtgaa
gatgttcctcagctctgtatgccctgcaagctgcacagcatcaaccctgtcgggggaagg
tggcagcgggatgcagtggccttactgaaggagctcctgctgaaccgctgtgtggacatg
agagtcatggagctgcccagcgaccccagggaccccctctcagtggagctgtttgtggac
ggactgagtctcagcaggatcctgtgtcaccacgaacacgcctccatggaccaagcactc
tctgtcaacaaggaattcacagtgatgtctgctcgcctcctggatgactgggacatcgac
actgagggtctgaagggcccagaggagccgctgctgggacccttcatctacccaaacctg
ccccaggagggggagcggattcaggtccgggtcaagcacctgtggacccccaacgagctg
ttcctgtggcctgtggatggcgccgatgaggtggatggagagactctggatgaagttctg
acccggatcaattcagacctcagcagtctgcaacgactcggcaacttccgtcaaggagct
ccgtgtctggcagagtacagggatgggaaatattaccgggccgaactgatcaagatcacc
agcgtggagcccgtcatgatcctggtgaagcacgtggactttggctccgacgacactctg
ccgcccagcaagctgcgtcagatgtgtgctgagctcatgagctttccgtcccgggcgctc
aaagtgaaagtggccggcttcaagcctccgagtaagagccggcagcagcagcaggacgtt
ctgccctacagcccggcctggagcgtgaaggccaccatggacatgatcgacatgctgcac
gggaacatcaccgcctctgtggtggcgcgggagccagagctcacggtgctgctgtacaat
gaggatgaggagctggtgcatcttcctctggtgagcaacggcctcgctgagtttgagtga
DBGET
integrated database retrieval system
