Pseudochaenichthys georgianus (South Georgia icefish): 117468461
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Entry
117468461 CDS
T09629
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
117468461 (dhx57)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117468461 (dhx57)
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
RWD
HA2_C
zf-CCCH_4
HA2_N
zf-CCCH
AAA_22
zf_CCCH_4
Torus
nSTAND3
AAA_19
NB-ARC
AAA_14
ATPase_2
GIT_CC
T2SSE
Viral_helicase1
zf-CCCH_2
Dpp_8_9_N
Motif
Other DBs
NCBI-GeneID:
117468461
NCBI-ProteinID:
XP_033968478
EnsemblRapid:
ENSPGEG00000024467
LinkDB
All DBs
Position
23:20819223..20831325
Genome browser
AA seq
1469 aa
AA seq
DB search
MNARRRGGQPNRGGGKFNKPRGRGGGGRGGGGGGGGGGGGGGSGSKGGACVYDDGDDFSL
DSGPSRPSRPGRGRGGGRGGGGRAGGGRGSGGRGGSSGGGRGGGRGSGSSGGGRDGGRGR
DRGKSSSKPLPRSLARTRTSPKRDDSIRPEMSTMPMQKIFMTTENQEQLKELLRNLQTRD
FDEPYDESDSEYSEEEEDEEEIDELDHRVEGQFWATTDEPVEKAESPVYLTESSDEERPT
PEPVLSLFAIGKLCRYGFDRERGKQALEASGGEFGSTLEKLLLQIFSERYGQKAVSPDGL
EVVPRDECLSQRQEEALALAAIYGERFNERIANTVWTVTLDLSFLSDNAAKNGRHGRGGE
GVVHIRDVCRFFLKGQGCRFGDKCKFKHQLPTKGRSGSPDIQGPSQPGFSSFSPNEYELE
VRFPKGNRYPFQAPIVAFSTTDVSLGAAGRLSVTEKLFEEALAAAKSNEPVVYTLITMCE
DESAIKELLAVQHHKYSTPPPVLVLPRPSLPIVKIKSVRSNATEDSRSSSTSSRRTAPPT
NQRHIDLKEKVEAEELDEKDEDEDEEDVPVETESYVNLRKKMVNKHNMKIDNMQKENGKL
CREFKKKQSSGRFRSMLEQRRKLPAWNEKENILDLLERCQVLVVSGMTGCGKTTQIPQFI
LDASLGGPADQVVNIICTQPRRISAISVAQRVAQERAENLGNSVGYQIRLETVRSAATRL
LYCTTGVLLRRLESEADLKGVSHVIVDEVHERTEESDFLLLVLKDLIMQRPDLKIILMSA
TLNANLFSEYFFNCPTVHIPGRTFPVDQFFLEDALAKSGYVIEDGSPFMRSGKQNSSSTG
GRGGKSEPRDKVDDLGEDMWNYMSFQKKDTVKDSIPDQQLSLQDLTVRFKDTKKSVLKNI
AAMDLDKINMDLVESLLEWIVDGNHDYPPGAVLVFLPGLAEIKTLYEQLKSNRMFNNRGK
SRCEVYPLHSTLSNEEQQAVFRRPPEGVTKIIISTNIAETSVTIDDVVYVIDSGKMKEKR
YDATKSMESLEDSWVSRANALQRKGRAGRVASGVCFHLFTSHCFQHQLADQQLPEIQRVP
LEQLCLRIKILDLFADRMLESVFTRLIEPPAMESLDAAKQRLRDLGALTDDEKLTPLGYH
LACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKVAFAVAS
SDHLALVQAYKGWCCAAKNGHQAGFLYCRENFLSSRGLQEIASLKRQFAELLSDIGFIKE
GLRARVIERMSSKGTDGVLEATGHEANLNSDNIKLMSAMLCAALYPNVVQVRSPQGSYKM
TSKGAMMMQPKAHELRFMTKNDGAVHIHPSSVNYAVRHYNSPYLVYHEKVKTSRVFIRDC
TMVSVYPLVLFGGGQVHMELHKGEFVISLDDGWIRFAASSHQVAELVKELRWELDQLLED
KIRSPSMDLCTCPRGSRIIGMIVQLVTTQ
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaggagaagaggtgggcagcctaacagaggaggggggaagtttaacaagcca
agaggaagaggaggaggaggaagaggaggaggaggtggaggaggaggtggcggcggcggc
ggcggaagtggaagtaaaggaggagcttgcgtctatgatgacggtgatgatttcagtctt
gattccggaccctctcgtccaagcagacctggtagaggacggggcggtggccgaggtggc
gggggccgagctggcgggggccgaggtagcgggggccgaggtggtagcagtggtgggggc
cgcggtggcggtcgtggtagcggaagcagtggtggcggaagagatggcggtcgaggaaga
gatcgtgggaaaagcagcagcaagcctctcccaaggtccctggcgaggacacgaacaagc
ccaaagcgagatgacagcatccggccggagatgagcaccatgcccatgcagaagatcttc
atgactactgagaaccaagaacaactcaaggagctgctgcggaatctgcagacccgggac
tttgatgagccatacgatgaatctgattcagaatattctgaagaagaagaggatgaagag
gaaattgatgagttggaccatcgtgtcgagggccagttttgggccactactgatgagccc
gtggagaaggcagagagcccggtgtatctgaccgagtcgtctgatgaggaacggcccacc
cctgaacctgtcctctccttattcgccatagggaaactctgcaggtatggctttgacagg
gagcgtggcaagcaggcattggaggctagtggaggggaatttgggtccactctggaaaag
ctcctcctccagattttcagtgagcgctacggccagaaagcggtttcccctgatggtctt
gaagtggtgccgagggatgagtgtttgagccagaggcaggaggaagctctggctctcgct
gccatttacggtgagcgcttcaacgagcgcattgccaacacggtgtggactgtaaccctg
gacctctcattcctctctgacaacgcagccaagaatggcaggcatggtcgaggtggtgaa
ggagttgttcacatccgagatgtctgccggttctttttgaaagggcaaggctgtcgcttt
ggggacaaatgcaagttcaagcaccagctccccacgaaagggagatctggctccccagac
attcagggcccgagccagcctggcttcagcagcttttcccctaatgagtatgaactagag
gtgcgttttcccaaaggaaaccgttacccgtttcaggcaccaatagtcgccttcagcacc
accgatgtgtctttaggcgccgcggggaggctcagcgtgacggaaaaactgttcgaagaa
gcgttggccgcagcaaagagcaacgaacctgtcgtttacactctgatcacaatgtgtgaa
gatgaatctgccatcaaggaactgctggctgtccagcatcacaaatacagcacgcctccg
cctgtgctggtgcttcctcgaccctctcttcccatagtgaagattaagagcgtgaggagc
aacgctactgaggacagcaggagcagtagtaccagcagcaggaggacagcaccacctacc
aaccagagacacattgatttgaaagagaaagtggaggcagaggagctggatgagaaggac
gaggacgaggatgaggaggatgttccagtcgagactgagagttacgtcaacctgaggaag
aagatggtgaataagcacaacatgaagatagacaacatgcagaaagaaaatggcaagctg
tgccgggagtttaagaagaagcagtcctcggggcgtttcaggtccatgttggagcagagg
aggaaactgcccgcttggaacgaaaaagaaaacatcttggacctgttggagcggtgccag
gtgcttgttgtcagcgggatgactgggtgtggtaagaccactcagatccctcagttcatt
ctggatgcctctttagggggtccggcagatcaggtggtcaacatcatctgtactcagcca
cgccgaatctctgccatctctgtggcccagagagtggcgcaggagcgagcggagaatctc
ggcaactctgtgggctaccagatccgcctggagactgttcggtcggctgccaccagactg
ctgtactgcaccaccggcgtgttactgcggagactggagagcgaggcagacctcaaagga
gtatcgcacgtcattgtggatgaggtgcacgagcgaacagaggagagtgacttcctgctg
ttggttttaaaagacctgatcatgcagaggccagacctgaagatcattctgatgagcgcc
acacttaatgccaacctcttctctgagtatttcttcaactgtcccacggtgcacatacca
ggtcgtaccttccccgtcgaccagtttttccttgaagatgctcttgctaaatccggctat
gtcattgaggatggcagcccgttcatgcgctcagggaaacagaattcgtcttccacaggc
ggacgaggagggaaatcagagcctcgggacaaggtggacgacttgggcgaagacatgtgg
aactacatgtctttccaaaagaaggacactgtcaaagactccattccagaccagcagctc
agcctgcaggatctcacggtccgattcaaagacactaagaagtctgtactgaagaatatt
gctgcgatggacctggacaagatcaacatggacctggtggagagcctgctggagtggatt
gtagatggaaatcacgactaccctccaggtgcagtgctcgtgtttttgccaggcctggct
gagatcaagacgctgtacgagcagctcaagtccaacagaatgttcaacaaccggggcaaa
tccagatgtgaagtgtacccactccactcaaccttgtccaatgaggagcagcaggctgtt
ttccgccgacccccagagggagtcacgaaaattatcatctccaccaacatcgctgagacc
tcggtaaccattgacgacgtggtatatgtcatcgactccggcaagatgaaggagaagaga
tacgatgccactaaaagcatggagagcctggaggactcgtgggtgtctcgggccaacgct
ctgcagaggaagggtcgagcgggacgcgtggcctcgggggtctgcttccacctcttcacc
agccactgcttccaacaccagctggcagaccagcagctgcctgagatccagagagtgcct
ctcgagcagctctgcctccgaatcaaaatcctggacttgtttgctgatcggatgctggag
tccgtcttcactcggctcatcgagcccccggctatggagagcttagacgcagccaagcag
cgcctgcgggacctcggggccctcactgacgatgagaaactgaccccgctgggctaccac
ctggcctgcctgcccgtcgacgtgcgcatcgggaaactcatgctgttcggcgccatcttc
cgctgcctcgaccctgcactcactatcgctgccagtctggccttcaaatcgccctttgtg
tctccatgggataagcgagaagaagccaatgagaagaaagtggcctttgccgtggcgagt
agtgaccatctagctctggtacaggcatacaagggatggtgctgcgctgctaagaatggc
caccaggccggcttcctctactgcagggagaacttcctgtcttcacgaggcctacaggag
atcgccagtctgaagaggcagtttgctgagctgctgtctgacatcggcttcatcaaggag
ggactgagggccagggttatcgagcgcatgagctctaagggcactgatggcgttctggag
gccaccggccacgaggctaacttgaactcggacaacatcaagctgatgtccgccatgctc
tgtgccgcgctctatcccaatgtggtccaggtccgatctcctcaggggagttacaagatg
acgagcaaaggagcgatgatgatgcagcccaaagcccacgagctccgcttcatgacgaag
aacgacggcgccgtccacatccacccgtcgtctgtcaactacgcagttcgccactacaac
agcccgtacctggtttaccacgagaaggtgaagacaagccgagtcttcatcagggactgc
accatggtgtcggtgtacccgctggtgctgttcggaggcgggcaggtccacatggagctg
cacaagggagagtttgtcatctccctcgacgacgggtggatccgatttgccgcctcttct
catcaggtggctgagctggtgaaggagctgcgctgggagctggaccagctactggaggac
aagatcaggagccccagcatggacctgtgcacgtgtccccgcggctcccgcatcatcggc
atgatcgtccagctcgtcaccacacagtag
DBGET
integrated database retrieval system
