Pseudomonas germanica: J0G10_25595
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Entry
J0G10_25595 CDS
T08191
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00470
D-Amino acid metabolism
pgf00550
Peptidoglycan biosynthesis
pgf01100
Metabolic pathways
pgf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J0G10_25595
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J0G10_25595
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
J0G10_25595
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgf01011
]
J0G10_25595
Enzymes [BR:
pgf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
J0G10_25595
Peptidoglycan biosynthesis and degradation proteins [BR:
pgf01011
]
Precursor biosynthesis
Amino acid ligase
J0G10_25595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATP-grasp_5
GARS_A
TTL
ATPgrasp_YheCD
FOG_N
Motif
Other DBs
NCBI-ProteinID:
QYY81056
LinkDB
All DBs
Position
complement(5791391..5792350)
Genome browser
AA seq
319 aa
AA seq
DB search
MTAAYAKLFSTIAPKDFGRVAVLFGGLSAEREVSLKSGNAVLDALQSAGVDAFGIDVGED
ILQRLLSEKIDRAFIILHGRGGEDGSMQGLLEVAGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHAVLCSEADCISAATELGFPLIVKPAHEGSSIGMAKVSSASELIDAWKAAST
YDSQVLVEQWIQGPEFTIATLRDQVLPPIALGTPHTFYDYDAKYIANDTQYRIPCGLDAA
KEQELMDLTAKACEALGIAGWGRADVMQDADGQFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAASVEDARG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcctacgccaagctgttttccactatcgcgccgaaagacttcggccgtgtc
gccgtgctcttcggtggcctgagtgccgagcgtgaggtgtcgctgaaatccggtaacgcc
gtactcgacgcgctgcaaagcgctggcgtggacgcgttcggcatcgacgttggcgaagac
attctgcaacggctgctcagcgaaaagatcgaccgcgcgttcatcattcttcacggccgt
ggcggtgaagacggctccatgcagggcctgctcgaagtggcgggcattccgtacaccggc
agcggcattctcgcttcggcactggcgatggacaaactgcgcaccaagcaggtctggcac
agcctcgggattccgacgccgcgtcacgccgtgctgtgcagcgaagccgattgtatttcg
gcggcgacggaactgggcttccctttgatcgtcaaaccggcgcatgaaggttcaagtatc
gggatggccaaagtgagttctgcgtccgagttgatcgacgcatggaaagcggccagtacc
tacgattcgcaagtcttggttgagcaatggattcaaggtccggagttcaccatcgccacc
ctgcgtgaccaggtgttgcctccgattgccctgggtacaccgcacacgttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcattccgtgcgggctggatgccgcc
aaggaacaggaactcatggatctcacggccaaggcctgtgaggcgctgggtattgccggt
tggggcagggcggacgtgatgcaggacgccgacgggcagttctggttcctggaagtgaac
accgcaccgggcatgaccgatcacagtctggtaccgatggcggcccgtgcggctggcctg
gatttccagcaactggttctggccattctggccgccagtgttgaagacgctcgaggttaa
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