Pseudomonas germanica: J0G10_28470
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Entry
J0G10_28470 CDS
T08191
Name
(GenBank) GMC family oxidoreductase N-terminal domain-containing protein
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00984
Steroid degradation
pgf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
J0G10_28470
Enzymes [BR:
pgf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
J0G10_28470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
Abhydrolase_1
Abhydrolase_6
DAO
Pyr_redox_2
FAD_binding_2
FAD_binding_3
FAD_oxidored
NAD_binding_8
Hydrolase_4
Pyr_redox
HI0933_like
GIDA
DUF4917
Lycopene_cycl
Fer4_9
Fer4_6
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
QYY81592
LinkDB
All DBs
Position
complement(6399282..6402734)
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AA seq
1150 aa
AA seq
DB search
MTRIATPISEIKEHYDVIVIGSGYGGGIAASRLSRAGKRVCLLERGREIQPGEYPNTMIA
ATEELQVHDPDGHIGSRTGLFDLHVNAQQNVVVGCGLGGTSLINANVALEPEPGVFDDPR
WPQAVREHRDTLLKDGYARAREMLKPNPYPSTAPNLPKLDANKKSAEYLKQGAHFYKPPI
NVTFDKLPNNLNHVGVEQLPCNQCGDCVSGCNNKAKNTTLMNYLPDAWNYGAEIFCQAEV
RHLERDGEGWIVHFQYLDSGRETFNAPTLFVKADIVVVSAGTLGSTEILLRTRDKGVVMS
AQLGENMSGNGDILGFGHNCEQTINGIGFGAHPAKELHPVGPCITSVIDMRTEGDWRSRM
VIEEGSIPGALGRPMVPAMAGFAEMIGVATDDSFSGKVKYKAREAESFLRGPYYGALHNM
QTYLIMSHDSGQGRMVLDNKDQLRIDWPGVGEQENFKLGNERLHQSTKALGGVWVENPIW
TKLLKHSIVSVHPLGGCVMGEDAAQGVVNHKGQVFSGASGSDVYANLYVTDGAVIPTSLA
VNPLLTISAVSERNMGLLAADRGWQIDYTLPSAPRKPVAPPTLGVQFTETMKGYFSRAFT
AAQSTDLKVYEAAAKRGEADNSPIDFTLTITANDLNRMIKEPEHAATIVGTVIAPALSPQ
PLTASNGVFNLFEQFEQQVDTRHMKYDMKLTAEDGNDYFFSAFKTVPEDNGVLNIWHDTS
TLYVTLYRGPDKTGEVIGSGVMHIHPTDFAKQMTTMKVLNARNERERIEGLARFGKFFAG
ILWESYGGVFAGDIYFNPDAPPRLKRPLDAPTPAVHFFPTEDGVELRLTRYQAGSKGPVM
LVHGLGVGSNIFSTDTIQTNLLEYLCKHDYDVWLLDFRVSILLPASKKEWNGDQIAQYDF
KAAIAQIQQQTQAKDVQCVVHCYGATTFFMSLLAGLQGVRSVVCSQIAADTVVATATGLK
AGLHLPGMLDAIGIKSMTAYADSKENWFNRLYDKALNGYARIEAQGYCTNPVCHRITFMY
ASLYRHDTLNETLHDNLHELFGESNIETFEHLALIVRKGHLVDFKGNDVYMPHFDRLTMP
ICFISGADNQCYLPESTLKTYQRLCEMHGPERYSRQVVPGYGHIDCMFGKNAVVDVYPII
LAHLEKTALG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgacacggatcgcaacgcccatcagcgagatcaaggaacactacgatgtgattgtcatt
ggttcaggctacggcggcggcattgctgcctcgcgcctgtcccgtgccggcaaacgtgtg
tgcctgctcgaacgcggtcgggaaatccagcccggcgaataccccaacaccatgatcgcc
gccaccgaggaactgcaggtgcatgacccggacggccatatcggctcgcgcaccgggctg
ttcgacttgcatgtgaatgcccagcagaacgtcgtggtcggttgcggcctcggcggcacg
tcgctgatcaatgccaacgtggccctcgaaccggagccgggcgtattcgacgatccgcgc
tggccgcaagcggtgcgtgagcaccgcgatacgttgctcaaggacggttatgcccgcgcc
cgggaaatgctcaaacccaatccctacccgagcactgcacccaacctgcccaaactcgac
gccaacaagaaatccgcggaatacctcaagcagggcgcgcatttctacaagccgccgatc
aacgtgaccttcgacaagctgccaaacaacctcaaccatgtcggcgtcgagcaactgccg
tgcaaccagtgcggcgactgcgtgtcgggctgtaacaacaaggccaagaacaccacgctg
atgaactatctgccggacgcctggaactacggcgcggagattttctgccaggccgaagtg
cggcacctggagcgtgatggtgaaggctggatcgtgcacttccagtacctcgacagcggg
cgggagacgttcaacgcgccgacgctgttcgtgaaggccgacatcgtcgtggtctccgcc
ggcaccctcggctccacggaaattcttctgcgcacgcgcgacaaaggcgtggtgatgtcc
gcccagctcggcgagaacatgagcggcaacggcgacatcctcggcttcggccacaactgc
gagcagaccatcaacggcatcggttttggtgcgcacccggctaaggaactgcacccggtc
ggcccgtgcatcacctcggtgatcgacatgcgcacggaaggcgactggcgcagccgcatg
gtcatcgaggagggctcgatccccggcgcgctcggccggccgatggtgccggccatggcc
gggtttgccgagatgatcggcgtcgccacggatgacagcttcagcggcaaggtcaaatac
aaggcgcgtgaagcggaaagctttctgcgcggcccgtattacggcgcactgcacaacatg
cagacttacctgatcatgagccacgacagcggccagggacggatggtcctcgacaacaag
gatcaactgcgtatcgactggccgggcgttggcgagcaggagaacttcaagctcggcaac
gagcgtttgcaccagagcaccaaggcgctcggcggcgtgtgggtggagaacccgatctgg
accaaattgctcaagcacagcatcgtttcagtccacccgttgggcggttgcgtgatgggt
gaagacgcggcgcaaggcgtggtcaatcacaaggggcaggtgttcagcggtgccagtggc
agcgatgtttacgccaacctgtacgtgacggacggtgcggtgattccgacctcgctggcg
gtcaatccgctgctgaccatctctgctgtgagtgagcgcaacatgggcctgcttgccgcc
gaccgtggctggcagatcgactacacgctgccatccgcaccgcgtaaaccagtggcaccg
ccaaccctcggcgtgcagttcaccgaaaccatgaagggctatttctcccgggctttcact
gcggcgcaaagcaccgacctgaaagtctacgaagcagcggccaaacgcggcgaggcggac
aattcgccgatcgacttcaccctgaccatcaccgccaacgacctcaaccgcatgatcaag
gaacccgagcacgcggcgaccatcgttggcactgtcatcgccccagcgctgtcaccgcag
ccgctgaccgcgagcaacggcgtgttcaacctgttcgaacaattcgagcaacaggtcgat
acgcgccacatgaagtacgacatgaaactgaccgccgaggacggtaacgactatttcttc
agcgccttcaaaaccgtgccggaagacaacggcgtgctgaatatctggcatgacaccagc
acgctgtacgtgacgctgtatcgcgggccggacaagaccggtgaggtgatcggttccggg
gtgatgcatattcatccgaccgatttcgccaaacagatgaccaccatgaaagtcctcaat
gcgcgcaacgagcgcgagcgcattgaaggcctggcgcggttcggcaagttcttcgccggg
atcctctgggaaagttacggcggggtgtttgccggcgatatctacttcaatcccgacgcg
ccgccacggttgaaacggcccttggatgcgccgacgccggcggtgcatttcttccccacc
gaagacggcgttgaattgcgcctgacccggtatcaggccgggagcaaaggcccggtgatg
ctggtgcatggcttgggcgtgggttcgaatatcttttccaccgacaccatccagaccaat
ctgctggaatatctgtgcaagcacgactacgacgtgtggttgctggattttcgcgtgagt
atcctgttgccggcgagcaagaaagagtggaacggcgaccagatcgcccaatacgatttc
aaggctgccatcgcgcagattcagcagcagacccaggccaaggacgtgcagtgcgtggtg
cattgctacggcgcaacgaccttcttcatgtcgttgctcgccggtttgcagggtgtgcgt
tcggtggtctgctcgcagattgccgctgacaccgtagttgccactgccacagggctgaag
gccggattgcacctgccggggatgctcgatgcgatcggcatcaagtcgatgaccgcttac
gccgacagcaaggaaaactggttcaacagactctacgacaaggccctcaacggctacgcg
cggatcgaggcgcagggctattgcaccaatccggtgtgccaccggatcaccttcatgtac
gcgtcgctgtatcgccacgacaccctcaacgaaaccctgcacgacaacctgcacgagttg
ttcggtgagtcgaacatcgaaaccttcgagcacctggcgctgatcgtgcgcaaagggcac
ctggtggatttcaaaggcaacgatgtgtacatgccgcactttgatcgactgaccatgccg
atctgttttatcagcggtgccgacaaccagtgctacctgccggaaagcaccctcaagacc
taccagcgcttgtgcgaaatgcatgggccggagcgctatagccggcaagtggtgccgggc
tacggccacattgactgcatgttcggcaagaacgcggtggtcgatgtctacccgatcatc
cttgcacacctggagaaaaccgccctcgggtag
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