Photobacterium ganghwense: FH974_10140
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Entry
FH974_10140 CDS
T07175
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FH974_10140 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgh02000
]
FH974_10140 (msbA)
Enzymes [BR:
pgh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FH974_10140 (msbA)
Transporters [BR:
pgh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FH974_10140 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_16
DEAD
SLFN-g3_helicase
AAA_29
APS_kinase
AAA_30
nSTAND3
AAA_24
MMR_HSR1
AAA_25
AAA_15
DUF87
G-alpha
ABC_membrane_2
AAA_18
AAA_23
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
QSV13111
LinkDB
All DBs
Position
1:complement(2229181..2230938)
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AA seq
585 aa
AA seq
DB search
MIQPKDQSTWETFKQLWPSISLYKTGLAVAVVALILNAASDALMLSMIKPLMDESFGGLG
SLESNFLAMMPIYLLGLMILRGVSGFVSTYCLAWVSGNVVMAMRRQMFNHFMKMPVSFFD
KESAGKLLSRITYDSEQVASATSGALVSLVREGATIIALMAIMFYNSWQLSSILLIIAPV
VAFSIRVVSKRFRRISKNMQDAMGSVTSSAEQMLKGHKVVLSYGGQQVEQERFEKVSNRM
RQQTMKLVSAQAIANPVIQVIASLALVVVLILANTESLRESLTPGTFALIFGSMFGLMRP
LKALTNVTSQFQRGMAACQTLFGLMELEAEKDTGTFETKRVKGDIQVKNVTFTYPTKDTP
ALRNISFDLPAGKTLALVGRSGSGKSTIANLLTRFYDIDSGEITLDGRNICDYKLANLRE
QVAVVSQNVHLFNDTIANNIAYASGEQYSRADIEKAAELAHAMDFINNMEHGLDTVIGEN
GVSLSGGQRQRIAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKDRTVVVIAH
RLSTIENADQILVVDEGDIIERGVHQELLAQDGAYAQLHRIQFGD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgattcaacccaaagaccaatccacttgggaaacgtttaagcaactgtggccctctatc
agtctgtataaaaccggactggccgttgccgttgtcgccctgatcctcaatgcagccagc
gacgcgctgatgctttccatgattaagccgctgatggacgaaagtttcggtgggctgggc
agccttgaatctaatttcctggccatgatgccgatttacttgttgggcctgatgattttg
cgcggcgtcagcggttttgtatcgacgtactgcctggcatgggtttccggcaatgtcgtc
atggctatgcgccgtcagatgtttaaccacttcatgaaaatgccggtcagcttttttgac
aaagaatcggccggtaagctgctgtcgcgaattacctatgactcagagcaggtcgcttca
gccaccagtggtgcgctagtcagtctggtacgtgaaggcgcgaccattatcgcgctgatg
gctatcatgttttacaacagctggcagttgtcatcgatcctgctcattattgcgccggtc
gttgcgttcagtattcgcgtcgtttccaagcgtttccgtcgtatttcgaagaatatgcag
gatgcgatggggtctgttacctcgtctgccgagcagatgctcaagggccacaaagtggtg
ctgagttacggtggtcagcaggtagagcaggagcgctttgaaaaagtcagcaaccgcatg
cgccagcagaccatgaaactggtgtcggcacaggcgattgctaacccggtgattcaggtg
attgcttctctggcactggtcgtggttctgattcttgctaataccgagagtctgcgtgag
tcgctgacaccaggtaccttcgccctgattttcggttcgatgtttggtctgatgcgccca
cttaaagccctgacgaacgtcacctcacagttccagcgtggtatggcagcgtgtcagaca
ctgtttggcctgatggagctggaagcggaaaaagacacagggacttttgaaacgaagcgt
gtcaaaggcgatatccaggtgaagaatgtcacctttacttatccgaccaaagataccccg
gcactgcgtaatatcagctttgacctgccggccggtaaaacactggcgctggtcgggcgt
tcgggttcagggaaaagtaccattgccaacctgctgacccgcttctacgacattgactcc
ggtgagattactctggatggccgcaatatttgtgattacaagctggctaacctgcgtgag
caggtggcggttgtgtcgcagaatgtgcacctgttcaacgacaccatcgccaacaacatt
gcgtacgccagcggtgagcaatacagccgcgctgatattgaaaaagcggcagagctggcc
catgcgatggactttatcaacaacatggaacatggcctggataccgtgattggcgaaaac
ggggtcagcctgtctggtggccagcgtcagcgaatcgcgattgcccgtgccttgctgcgc
gatgcgccggttctgattctggatgaagccacatcggctctggataccgaatcagagcgc
gcgatccagtctgccttggatgagctgcagaaagaccgtaccgtggtggtgattgcccac
cgtctgtcgacaattgaaaatgccgatcagatcctggtggttgatgaaggcgatattatc
gagcgtggcgttcaccaggagctgctggcgcaggacggtgcttacgctcagttgcatcgt
atccagtttggtgactga
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