Pteropus giganteus (Indian flying fox): 120588247
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Entry
120588247 CDS
T07511
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pgig
Pteropus giganteus (Indian flying fox)
Pathway
pgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120588247 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120588247 (CNOT6L)
Enzymes [BR:
pgig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
120588247 (CNOT6L)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120588247 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120588247 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
120588247
NCBI-ProteinID:
XP_039701458
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MRLIGMPKEKYDPPDPRKIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTA
LHLNDNYLSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNYNCLRVLPYE
LGRLFQLQTLGLKGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITIKER
DQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQE
VETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAH
MHWDPEYSDVKLIQTMMFVSEVKNILEKASRPGSPTADPNSIPLVLCADLNSLPDSGVVE
YLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYT
FDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPP
LLPLVNGVHLPNRR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagactaatagggatgccaaaggaaaaatatgatcctccagatcctcgcaaaatttat
accatcatgtcagcagaagaggtagccaatggaaaaaaatctcactgggcagaattagaa
atctcgggtagagtgcggagcttaagtacatcactttggtcattgacacacttgacagca
ctgcacctaaatgacaattaccttagtcgcattccacctgatattgccaagcttcataat
ctggtttacctggatttgtcatccaataaactcagaagtttaccagcagaactaggaaac
atggtgtctctcagggaattgcttttaaattacaattgcttacgggttttgccttatgaa
cttggtcggctcttccagctacaaactctaggtttgaaaggcaatcctttatcacaggat
attctcaatttataccaggacccagatggaacccgaaagctactgaacttcatgctagac
aatcttgcagttcatccagagcagcttcctccgaggccatggattacaataaaagaacga
gaccaaattctgccatcagcatcattcacggttatgtgttacaatgtgttatgtgataaa
tacgccacccggcagctatatggctattgtccatcctgggcattaaactgggaatacagg
aaaaagggaattatggaagaaattgttaactgtgatgcagatatcattagtcttcaggaa
gtggaaacagagcaatacttcactctctttctgccagcgttgaaggagcgtggatatgat
ggatttttttctccaaagtcacgtgccaaaatcatgtctgagcaggagagaaagcatgtg
gacggttgtgcaatattcttcaaaacagaaaaatttacattggtgcagaagcatacagtg
gaatttaaccaagtagcaatggctaattcagatggatccgaagctatgctgaacagagtg
atgacaaaagataatattggtgttgctgtggtattagaggtccacaaagaactatttgga
gcaggtatgaaacctattcatgctgcagacaaacaactgcttatagtggcaaatgcccac
atgcattgggacccagagtattctgatgtgaaactcatccagaccatgatgtttgtctca
gaggttaaaaacattctggagaaagcctctagacctggcagcccaactgcagatcctaat
tccatcccgctggtgctatgtgcagatcttaattcattgccagattcaggtgttgtggaa
tatttaagcaatggaggagtagctgacaaccataaagacttcaaggagctaaggtacaat
gagtgtcttatgaacttcagctgcaatggaaagaatggaagctcagaagggagaatcaca
catggcttccaactgaagagcgcttatgaaaataacttgatgccttacaccaattacacc
tttgatttcaaaggcgtgattgactacattttctattccaagactcatatgaacgtgctt
ggtgtcctggggcctttagatcctcaatggctggttgagaacaacatcactgggtgtcca
cacccacacatcccttcagaccacttctcactgttaacacaacttgaactccaccctcca
ctcctgcctcttgtcaatggtgttcacttgcctaatcggaggtag
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