Pteropus giganteus (Indian flying fox): 120597092
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Entry
120597092 CDS
T07511
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pgig
Pteropus giganteus (Indian flying fox)
Pathway
pgig04151
PI3K-Akt signaling pathway
pgig04510
Focal adhesion
pgig04512
ECM-receptor interaction
pgig04820
Cytoskeleton in muscle cells
pgig04926
Relaxin signaling pathway
pgig04933
AGE-RAGE signaling pathway in diabetic complications
pgig04974
Protein digestion and absorption
pgig05146
Amoebiasis
pgig05165
Human papillomavirus infection
pgig05200
Pathways in cancer
pgig05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120597092 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120597092 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120597092 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120597092 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
120597092 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
120597092 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120597092 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
120597092 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
120597092 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
120597092 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
120597092 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgig04147
]
120597092 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pgig00536
]
120597092 (COL4A3)
Exosome [BR:
pgig04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120597092 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pgig00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120597092 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
120597092
NCBI-ProteinID:
XP_039711718
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search
MRPRTAPRPPALLLLLLTLLLLAAAPAASKGCACEDKGQCFCDGTKGEKGDKGFPGPPGS
PGQKGFPGPEGVPGPRGPKGSPGLPGLIGPKGVRGITGLPGFSGPPGLPGTPGHPGPYGM
AGLPGCNGSKGDRGFPGLRGTPGYPGILGAPGLKGEKGAPAVGEGIELDGKGDPGWPGTP
GFQGLPGLPGFPGPVGPPGPPGFFGFPGTMGPPGFKGHMGDNMIGQKGERGVKGLAGPPG
LPGTVIVTLTGPDNRTDLKGEKGDKGATGRSGPPGPSGPPGESYGSEKGAPGDPGPQGKS
GKDGAPGFPGTEGAKGDRGLPGLAGEDGIKGWKGDIGPPGFRGPTEYYDAFQEKGHEGIP
GPPGPKGPRGPQGPTGPPGVPGKPGLSRPGLRGAPGPPGIKGNKGERGPPGENTVGSPGS
SGCPGSPGTPGPPGPPGPPGDIVFRKGPPGGGGFPGQVGPPGIPGVEGPKGEPGDVCTEC
PCVPGPPGLPGLPGLDGVKGTPGGRGEAGTKGNPGSPGSAGLPGCPGFPGARGDPGLKGE
KGEASQPEGQVGAPGDPGPRGQPGRRGLDGLPGTPGVKGVPGPKGEPALSGEKGDQGRPG
DPGIPGSPGPAGPAGPPGYGPQGELGPKGAQGIPGAPGLPGEAGPRGEFSVSTPVPGPPG
PPGPPGHAGPRGPPGFPGPPGKCDNPGVPGPDGEPGIPGIGFPGPPGPKGDRGFPGTKGS
PGCPGEMGKPGSPGKPGVPGDKGEPGLAIPGEPGIPGFPGEKGNSGENGEIGLPGFPGLP
GIPGTGGLDGPRGDPGQPGPPGEKGLPGRCTVGPRGAQGLPGLNGLKGQQGRRGEIGLKG
DPGIPGLDRPGFPGEPGPPGIPGRQGEMGPPGQKGYPGNPGFLGPPGERGTVGMIGYPGH
IGLPGPAGNPGPQGRKGSIGIPGAKGERGPSGAKGEEGDKGPPGPSQISLLVGDKGEPGL
KGFAGRPGEKGDRGIPGLPGFQGLEGPPGPPGPPGPRGDPGSTGNPGEPGPRGVPGSMGN
MGVPGTKGKRGTLGLPGPPGRPGLPGIHGLQGNKGEPGYSEGTRPGPPGPKGEPGLPGAV
GKKGERGPPGAPGHSGPAGPEGVPGDPGSPGHPGKPGPAGDPGFKGIRGFPGFPGTKGPP
GPPGFPGSPGPMGMRGNQGRDGIPGPAGEKGESGLLGAHPGPKGNPGAQGAKGDRGAPGL
PGLPGRKGAVGDVGPRGPTGVAGLPGPPGFPGALVPGQKGNRGPPGSRGNPGEPGPPGPP
GGHIKGIKGDKGFMGEPGPRGPPGTIGDPGPPGHLGAPGTPGLPGLRGDSGFQGFPGMKG
EKGDPGFLGSVGPPGQTGPEGPPGPRGDPGTVQIISLPGSPGPPGQPGEPGMQGEPGPPG
PLGTPGPCGPRGKPGKDGKPGTPGPPGEKGSKGCKGEQGPPGFDGLPGLKGKPGDTGPPA
TRTALRGFIFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNERAHGQDLGTLGSCLQRFT
TMPFLFCNINDVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAMAI
AVHSQTTDIPSCPQGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHG
RGTCNYYSNSYSFWLASLNPKRMFRKPIPSTVKAGELEKIISRCQVCMKRRH
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccccggacggcgcccaggccgcctgcgctgctgctgctgctgctcacgctgctg
ctgctggcggcggcgcccgcggccagcaagggctgtgcctgtgaggacaaaggccagtgc
ttctgtgatgggaccaagggggagaagggggataaaggttttcctggaccccctgggtct
cctggccagaaaggattcccaggtcctgaaggcgtgcctggaccacggggacccaagggc
tctccaggacttccaggactcattggtcccaaaggtgtaaggggaataactggattacca
ggattttcgggtcctcccggacttccaggcaccccgggccatcctggaccttatggaatg
gctggtttaccaggatgcaatggttctaagggcgaccgagggtttccgggacttcgtggg
acaccaggctacccagggatcctgggtgctcctggcttgaaaggagaaaagggtgctcct
gctgtaggagaaggtatcgaactcgatggaaaaggggaccccgggtggccaggaactcca
ggattccagggtttgccaggcctcccgggttttcccggacccgtcggcccacctggccct
ccaggattctttggctttccaggaaccatggggcctccaggatttaagggacacatggga
gataacatgatcggacaaaaaggagagcggggtgtgaaaggactggcaggaccccctgga
ctaccaggaaccgtgatcgtgacgctgacgggcccagataacagaacggacctcaagggg
gagaagggagacaagggagccacgggccgatctggacctccgggaccctcaggaccacct
ggagaatcttatggatcagaaaaaggtgctcccggagatcctggcccacagggaaaatct
ggaaaagatggtgccccaggttttcctggcacagagggagccaaaggcgacaggggcctc
cctgggttagctggcgaggatggcattaaggggtggaaaggagacattggccctccagga
tttcgtggtccaacagaatattatgacgcattccaggaaaagggacacgagggaatccca
ggtccaccaggacccaaaggacctcgtggcccacagggtcccaccggccctcctggagtt
cctggaaaacccggtttatcaaggcctggcctcagaggagcccccggaccaccaggcata
aaaggcaataaaggggagcgaggacccccaggagagaatacagtggggtctcccgggtcc
tcaggttgtcctggttcaccaggcaccccagggccaccgggacctccaggaccaccaggt
gacatcgtttttcgcaagggcccacctggaggtggtggatttccaggccaggtggggcct
ccggggatcccaggagtggaagggcccaaaggggagccaggtgacgtgtgcacagagtgt
ccttgtgttccagggcctccgggcctcccaggattgccagggttagatggcgtaaaagga
accccaggcggacgaggggaagctggcactaaaggaaacccagggtccccaggaagcgcg
ggtctcccaggatgtccaggattcccaggtgctcggggtgatccaggacttaaaggagaa
aaaggtgaagcatctcagccagagggacaagtaggtgccccgggggatccgggacccaga
ggacagccaggaagaaggggcttagatggacttcctggaacccctggagtaaagggagta
ccaggacctaaaggtgaaccggccctcagtggtgagaagggggaccagggtcgtccagga
gatcctggcatccctgggtccccaggacctgcaggaccagctggaccaccaggctatgga
ccacagggagagcttggtccaaagggcgcccaaggcattcctggagcccctggactacct
ggagaagccggtcctaggggagaattcagcgtttcgacaccagtcccaggccccccagga
cctccagggcctccaggccatgctggcccccgaggtccacctggtttccctggaccccca
ggaaaatgtgataatccgggtgttcctgggcctgatggtgaaccaggaattccaggaatt
ggattccctgggcctcctggacctaagggagaccgaggttttccaggaacaaaaggatca
ccaggttgtcctggagaaatgggaaagccggggtcacctggaaagccaggtgtcccagga
gacaagggagaaccaggactagcgatccctggagaaccaggaataccaggttttccagga
gaaaaaggcaattctggggaaaatggagaaattggactccctggatttccaggtctccct
ggaattccgggaactggagggcttgatggaccacgaggagatccagggcagcctggacca
cctggagaaaaaggactcccaggaagatgcacagtgggtcccaggggagcccaaggactt
ccgggcttaaatggattgaaagggcaacaaggcagaagaggtgaaataggactaaaggga
gacccaggtattccaggcttggataggccaggatttcctggagaacctggaccaccagga
ataccgggtcgtcaaggtgagatgggaccacctggtcaaaaaggatatccaggaaatcca
ggatttttagggccaccaggtgaaagaggaaccgttgggatgataggctatcctggacac
atcggccttccggggcctgctgggaacccaggcccccagggacggaagggtagcattgga
attcccggagcgaagggtgagagaggaccttcaggagccaagggggaagaaggggacaaa
ggacctcccgggccttctcaaatatccctcttagtgggggacaaaggggaaccaggcctc
aaaggatttgcaggaaggccgggggagaaaggagacagaggcattccagggttaccaggt
ttccaaggactcgaagggccacccggaccaccaggaccaccaggccccagaggagatcca
ggcagcactgggaatcctggagaaccaggaccacgtggtgtgccaggaagtatggggaac
atgggggtgccaggaactaaaggaaagaggggaactttgggactcccaggtccacctgga
agaccaggtctcccaggtattcatggtctccaaggaaataagggagagccaggttattca
gaaggtacaaggccaggaccaccaggacctaagggagaaccaggattgccaggtgccgtg
ggaaagaaaggagaaagagggccgcccggcgcacctggacattcagggcctgctggaccg
gagggagtccctggagatcccgggagtcctggccacccaggaaagccaggtcctgctggt
gatccagggtttaaaggaatcagaggcttccctggctttccaggaacaaaaggccctcca
ggtcctccaggattcccaggaagtcctggaccaatgggtatgagaggtaaccaaggacgt
gatgggattcctggaccagcaggagaaaagggagaatcgggtttgctgggggcacatcca
ggcccaaaagggaaccctggtgctcaaggggccaaaggagacaggggcgccccaggcctg
cctggcctccccggcaggaaaggagcagtgggagacgttgggccgcgaggccccacaggt
gtggcggggctcccggggccaccagggtttcctggtgccctcgtccctggccagaaagga
aatcgaggcccaccaggctcaagaggaaacccaggtgaacccggtccccctggacctcca
gggggtcacataaaaggcatcaaaggagacaagggatttatgggcgagcctggcccaaga
ggaccacctggaactataggagacccagggccaccgggtcacctgggagcaccaggtact
ccaggtctgccggggctcagaggtgattctggattccaaggatttcctggcatgaaagga
gaaaagggtgacccaggatttctgggatcagttggacctccagggcaaactgggccagaa
ggaccaccaggtccacgtggagaccccggcacggttcagatcatctcccttccaggaagc
ccagggccgccaggccaacctggagaaccagggatgcaaggagaacctgggccaccaggg
ccactgggaacaccaggaccctgtgggccaagaggtaaaccaggcaaagatggaaaacca
ggaactcctggaccacctggagaaaaaggcagcaaaggctgtaaaggagaacaaggacca
cctggattcgatggactgccaggtttgaaggggaaacctggagacaccggaccacctgca
accaggacagcgctgagaggcttcattttcacgcggcatagtcagaccacagcaattcct
tcctgtccagaagggacagagccactgtacagtgggttttctcttctttttgtacaagga
aatgaacgagcccacggacaagacctgggaactcttggaagctgcctacagcgatttacc
acaatgccattcttattctgtaacatcaatgatgtatgtaattttgcatctcgaaatgat
tattcatactggctgtcaacaccagctctgatgccaatggacatggctccaattactggc
agggccctggagccttatattagcagatgcactgtctgcgaaggtcctgcgatggccata
gccgttcacagccaaaccaccgacatcccctcatgtccccagggctggatttctctatgg
aaaggcttttctttcatcatgttcacgagcgcaggttctgagggtgctgggcaagcattg
gcgtcccctggatcctgcttggaagaattccgagccagtccatttatcgaatgccatgga
agaggaacatgcaactactattcaaattcctacagtttctggttggcttcgttaaaccca
aaaagaatgttcagaaaacctattccatcaactgtgaaagctggggagttagaaaaaata
ataagtcgctgtcaggtatgcatgaagagaagacattga
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integrated database retrieval system
