Panacibacter ginsenosidivorans: FRZ67_06000
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Entry
FRZ67_06000 CDS
T06131
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00470
D-Amino acid metabolism
pgin00550
Peptidoglycan biosynthesis
pgin01100
Metabolic pathways
pgin01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FRZ67_06000
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FRZ67_06000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FRZ67_06000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgin01011
]
FRZ67_06000
Enzymes [BR:
pgin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
FRZ67_06000
Peptidoglycan biosynthesis and degradation proteins [BR:
pgin01011
]
Precursor biosynthesis
Amino acid ligase
FRZ67_06000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CPSase_L_D2
ATP-grasp
ATP-grasp_4
GARS_A
TTL
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
QEC66876
UniProt:
A0A5B8V839
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All DBs
Position
1452949..1453932
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AA seq
327 aa
AA seq
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MKKRIALVTGGYSGEAQISYKSAITVAQNVDREKFDLYTIDICKEGWLYDDGKGNRTPVD
MNDFSINFDGNKLTFDAALMCIHGNPGEDGKLQGYFDMLKIPYTSCDAATSALTFNKRYT
VAVAAFSGIRVARSVLLIKNRFTNPEEIINNLQFPVFVKPNNGGSSIGMSKVNNASEELG
AAIEKAFNEDDQVLVEEFIQGRELTIGVFRKNNEIITLPMTEIISQKEFFDFEAKYLGKS
EEITPAEVDETVAEKIRAAAKKIYQVFNCKGIVRIDFIYNEKAAEPFMLEINTVPGQSEA
SLVPQQVKAMGWTLKEFYTAVIEEAFV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaattgcattggttaccggtggatatagtggcgaggcccagataagttat
aaaagcgctattaccgttgcacaaaatgtggacagagaaaaatttgacctttatacaatt
gatatatgcaaagaaggctggttatatgatgatggcaaaggcaatcgtacgcctgttgat
atgaatgatttttctataaattttgatggcaataagctaacttttgatgcagctttgatg
tgcattcacggcaaccccggcgaagatggcaaactgcagggctattttgatatgctgaaa
attccttacaccagttgcgatgctgcaaccagtgccttgacctttaataaaaggtataca
gttgcggttgcagcattcagtggcattcgtgtggcccgttctgtattgcttataaagaac
aggtttacgaatcctgaagaaatcattaataatttacagttccctgtttttgtaaaaccc
aataacggcggatcgagcattgggatgagtaaagtaaacaatgcatcggaagaactaggt
gcagcaattgagaaagcatttaatgaagatgaccaggtattggtggaagaatttatacaa
ggccgagaattaacgatcggtgtattcagaaaaaataatgaaatcattacattgccgatg
acagagatcatctctcaaaaagagttctttgattttgaagcaaaataccttggtaaaagt
gaagaaataacacctgcagaggtagatgaaactgttgcagaaaaaataagagcagcagcc
aaaaaaatttaccaggtatttaactgtaaaggtattgtgagaattgatttcatatacaat
gaaaaagctgcggaaccgtttatgctggagatcaataccgtgccggggcaaagtgaagcc
agtcttgtgccgcaacaggtaaaagccatgggctggacactgaaagaattttatacagca
gtaattgaagaagcatttgtgtag
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