Paenibacillus graminis: PGRAT_20315
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Entry
PGRAT_20315 CDS
T03325
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
pgm
Paenibacillus graminis
Pathway
pgm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGRAT_20315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgm02000
]
PGRAT_20315
Transporters [BR:
pgm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PGRAT_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
SMC_N
AAA_29
PRK
RsgA_GTPase
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AIQ69708
UniProt:
A0A089MDZ8
LinkDB
All DBs
Position
complement(4519966..4520931)
Genome browser
AA seq
321 aa
AA seq
DB search
MSDALLEVRHLKKYFPVTQGLLNRTVGHVKAVDDISLTLQPGETFGLVGESGSGKSTVGR
TILRLTEKTSGEVKFKGADIHSLSPAELRLLRPRMQLIFQDPYSALNPRVRVGDAIGEAL
LDHGLCSKHEVRELVLESLAACGLSSYHIDRFPHEFSGGQRQRIGIARALILNPDLIIAD
EPVSALDVSIQAQIINLFSKLQQSKGLAYLFISHDLSVVEHLCSRIGVMYLGSMVETAAR
DELFHNPLHPYTKALLSAVPVPVPRLKRERIVLKGDIPSPANPPSGCKFHTRCPFAVEVC
KAENPVFRDAGGGHFVACHLA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcactgcttgaggttaggcatctgaagaaatattttccggtcacccagggg
ctgctgaaccgcaccgttgggcatgtgaaggccgtagatgacattagcctcacacttcag
ccgggcgaaacctttgggctggtcggagaatccggcagcggcaaaagcacggtcggccgg
acgattctgcgtttgaccgagaaaacgtccggcgaggtgaagttcaaaggagcagacatt
cacagcctctcccctgcagagctccggctgctgcggccgcggatgcagctgatctttcag
gacccgtacagcgcactcaatccgcgtgtgcgggtaggcgatgcgatcggcgaagccctg
ctggaccatggtttatgctccaaacatgaagtgcgggagctggttctggaatcgctagca
gcctgcgggttatcctcgtaccacatcgaccgcttcccgcatgaattctccggcggacag
cgccagcggatcggaatcgcccgggcgctgattttgaacccggatctcatcattgccgat
gagccggtatcggcgctggatgtgtcgatccaggcccagattatcaatctgttcagcaag
ctgcagcaaagcaagggcctggcctatttattcatctcccacgatcttagtgtagtcgag
catttatgctcccggatcggggtcatgtatctcggttccatggtcgagacggctgcccgg
gacgagctgttccataacccgctgcatccctataccaaggctctgctctctgcggtgccc
gttccggttccgaggctgaaaagggaacggatcgtcctgaaaggggatattcccagcccg
gcgaatccgccctccggctgcaaatttcatacccgctgcccgtttgccgtagaggtgtgc
aaagcagagaaccccgttttccgtgatgccggaggcggacattttgtggcttgtcatttg
gcttga
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