Paraburkholderia graminis: CUJ91_22820
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Entry
CUJ91_22820 CDS
T05548
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
pgp
Paraburkholderia graminis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
VpsR
Sigma54_activ_2
HTH_8
HTH_17
Rod_cone_degen
HTH_23
AAA
Mg_chelatase
AAA_5
AAA_16
Xre-like-HTH
HTH_28
HTH_7
HTH_31
HTH_29
HTH_50
DUF134
HTH_3
HTH_IclR
TIP49
AAA_2
Motif
Other DBs
NCBI-ProteinID:
AXF10775
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Position
PHS1_B:complement(1033253..1034704)
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AA seq
483 aa
AA seq
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MEMTFASADTGRTVLYVSSSPDQKLADFLAASGWHAVHAKNAAGAERMIERDNVKVGLVE
LPEDCTTQQLSALAACMRRPETNWVAQIAPGQADNELVSRFILDYCFDFVTRPWLNERLV
FALGHAHGLSSLRHGHVAPEPSLGRHGMVGQCEAMQQLYRRIDKCGATEAPVFIAGESGT
GKELTALAIHERSPRTGRQFVAINCAAIPPSLLQAELFGHERGAFTGALQRKIGRIESAH
EGTLFLDEIGDMPHECQAVLLRFLQEGTIERLGGNGPIHVDVRVISATHVDLDKAVEDGR
FRADLYHRLCVLRLVEPPLRERGGDIKLLANYALSMYKQDGARKLRGLSSDAIVAMSNYA
WPGNVRELINCVRRAVVMSEGRFITANDLGLPATDNGPAVTLAEIRSKAEKDAIEHALQR
HGYKLSEAAVELGISRATLYRLMHADRLHPEPSGGNGSNGGADADGDSEAERRGHGLVST
ASV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgactttcgcatctgcggacaccggacgcaccgttctttatgtgtcgagctcg
cccgatcagaaactcgccgacttcctcgccgcatcgggctggcatgccgtgcacgcgaaa
aacgcggcgggcgcggaacgcatgatcgagcgcgacaacgtcaaggttggtctggtcgaa
ctgccggaagactgcacgacacagcagttgtccgcgctcgctgcgtgcatgcgccgcccc
gaaaccaactgggtcgcgcagatcgcgccgggccaggcggataacgaactggtcagccgc
tttatcctcgattactgcttcgacttcgttacgcggccgtggctcaacgagcgtctcgtg
ttcgcgctcggccacgcgcatgggctgtcgtcgctgaggcatggacatgtagcgccggaa
ccgtcgctcgggcggcatggcatggtcggtcaatgcgaggcgatgcagcagttgtaccgg
cgcatcgacaaatgcggcgcgaccgaggcgccggtgttcatcgccggcgaatcgggcacg
ggcaaggagctgaccgcgctcgcgattcacgaacgctcgccgcgcaccggccggcagttc
gtcgcgatcaattgcgcggcgattccgccgagcctgttgcaggcggaactgttcggtcac
gaacgcggcgcgttcaccggcgcgcttcagcgcaagatcgggcggatcgagagcgcgcat
gaaggcacgctctttctggatgaaatcggcgacatgccgcacgaatgccaggcggtgctg
ctgcgctttctgcaagaaggcacgatcgagcggctcggcggcaacggcccgattcacgtc
gacgtccgcgttatttcggcgacgcacgtcgatctcgacaaggcagtcgaagacggccgc
ttccgcgccgacctgtatcaccggctatgcgtgctgcgcctcgtcgagccgccgttgcgc
gaacgcggcggcgacatcaagctgctcgcgaactatgcgctcagcatgtacaagcaggac
ggcgcgcgcaaattgcgcgggctgtcgagcgacgcgatcgtcgcgatgtcgaactatgcg
tggccgggcaacgtgcgcgagctgatcaactgcgtgcggcgcgccgtcgtgatgagcgag
ggccgtttcatcaccgcgaacgacctcggcttgccggccacggacaacgggcccgccgtc
acgctcgcggaaattcgcagcaaggccgagaaagacgcgatcgaacatgcgttgcagcgg
cacggctataagttgtcggaggcggcggtcgaactgggcatctcgcgcgccacgctgtac
cggctgatgcacgcggaccggctgcatccggagccttccggcggcaacgggtcgaacggc
ggcgcggatgcggacggggacagcgaggctgagcggcgcgggcatggattggtgtcgacg
gcttcggtttag
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