Paraburkholderia graminis: CUJ91_31005
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Entry
CUJ91_31005 CDS
T05548
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03030
DNA replication
pgp03410
Base excision repair
pgp03420
Nucleotide excision repair
pgp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUJ91_31005
03410 Base excision repair
CUJ91_31005
03420 Nucleotide excision repair
CUJ91_31005
03440 Homologous recombination
CUJ91_31005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgp03032
]
CUJ91_31005
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_31005
Enzymes [BR:
pgp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUJ91_31005
DNA replication proteins [BR:
pgp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CUJ91_31005
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CUJ91_31005
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUJ91_31005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AXF12219
LinkDB
All DBs
Position
PHS1_B:2884210..2886951
Genome browser
AA seq
913 aa
AA seq
DB search
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYPDYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDV
IGTLSTEAEKRGMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDRAGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTALKWLTQYESLDGIVAHADEIKGAVGDNLRRALDFLP
MARKLVTVERNCDLTEHIASIEENLQSRPESREELRDVFTRHGFKTWLREVEIADAVEGP
ETDVPPALTVDHERHYETVQTWEQFDVWLQKINAAEITSFDTETTSLDPMVAQIVGLSFS
VEAGHAAYVPVAHRGPDAPVQLPRDEVLAKLKPWLESAEHKKVGQHLKYDEQVLANYGIE
MRGVEHDTLLQSYVLESHRPHDMDNLALRHLGIKTIKYEDVAGKGAQQIGFDEVALDKAA
EYAAEDADITLRLHQTLYPQLAAEETLEHVYRDIEVPTSRVLRKMERSGVLIDAEKLRQQ
SSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFERLELPVVKKTPSGAPSTDEEVLQ
KLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNASTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDESLLRAFSEGEDIHR
ATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARY
PGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKLSMIAVQKWIEESNIGTRMIMQVHDELILEVPDEELSDVRKRLPELMCGVAALKVPLV
AEVGAGLNWEEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaagccttgaaggtaagaccctgctattggtcgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctgcgcgggcccgacggtggtcccacgggt
gcgctctacgggatgatcaacatgctgcggcgcatgcgcaaggaagtcacagcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgtttcgcgacgactggtatcccgactat
aaggcgaatcgtccctccatgcccgacgatctgtcgcggcaaatcgagccgattcacgtg
gccgtgcgcgcgctcggctggccgcttctgatgatcgacggcgtggaagccgacgacgtg
atcggcacgctttccaccgaggccgaaaagcgcggcatgaacgtgatcgtgtcgactggt
gacaaggatctggcgcagctcgtgtcggatcatgtcaccctcatcaatacgatgaccaac
gaaaagctcgaccgtgccggcgtgctcgccaaattcggcgtgccgccggagcgcattgtc
gactacctgtcgttgatcggcgataccgtcgacaacgtgccgggcgtcgagaaatgcggg
ccgaaaaccgcgctcaaatggctgacgcaatatgagtcgctggatggcatcgtcgcacat
gcggacgagatcaaaggtgcggtaggagacaatctgcgacgcgcgctcgactttctgccg
atggcgcgcaagctcgtcaccgtcgaacgcaattgcgatctgaccgaacatatcgcgtcg
atcgaggaaaatttgcagagccgcccggaatcgcgggaggaattgcgcgacgtgttcacg
cgccacggcttcaagacctggctgcgcgaggtggaaattgccgacgcggtggaaggtccg
gaaaccgacgtgccgccggcgctcaccgtcgatcacgaacggcactacgaaaccgtgcag
acgtgggagcaattcgacgtgtggctgcaaaagatcaacgcggccgagatcacttcgttc
gatacggaaaccacgtcgctcgatccgatggtcgcgcaaatcgtgggcctgtcgttctcg
gttgaagccggtcatgccgcttatgtgccggtcgcgcatcgcggcccggatgcgcccgtg
caactgccgcgcgacgaagtgctcgcgaagctcaagccgtggctcgaaagcgcggagcac
aagaaagtcggtcagcatctgaagtacgacgaacaggtgctcgccaattacggcattgaa
atgcgcggcgtcgaacacgacacgctgctgcaatcgtacgtgctggaatcgcatcgtccg
cacgacatggacaacctcgcgctgcgccatctcggcatcaagacgatcaagtacgaagac
gtcgcgggcaagggcgcgcagcaaatcggtttcgacgaagtcgcgctcgacaaggccgcc
gaatacgcagccgaagacgccgacatcacgttgcgtctgcatcaaacgctgtatccgcag
ctcgcggcggaagaaacgctcgagcatgtgtatcgcgacatcgaagtgcccacgtcgcgc
gttttgcgcaagatggagcgcagcggcgttttgatcgacgcggaaaagttgcgtcagcaa
agcagcgaaattgcaacgcggcttatccagttggagagcgaggcatatgtgctcgccggc
ggcgaattcaacctcggttcgccgaagcagattggccagatcttcttcgaacgactcgag
ttgccggtcgtgaagaaaacgccgagcggcgcgccttcgacggacgaagaagtgctgcaa
aagctcgccgaagattatccgttgcccaagattctgctcgaacatcgcggcttgtcgaag
ctgaagtccacgtacaccgacaagctgccgcgcatggtcaacgcaagcacgggccgcgtg
cacacgaactatgcgcaggccgtcgcggtcacggggcgtcttgcgtcgaacgatccgaac
ctgcagaacattcctgtgcgcaccggcgaaggccgccgcattcgcgaagccttcattgcg
ccgccgggacacaagctcgtttccgcggattactcgcaaatcgaactgcgcatcatggcg
cacatttccggcgacgaatcgttgctacgcgccttctcggaaggtgaagacattcaccgc
gcgaccgcagcggaaattttcagcgtgacgccgctcgaagtgtcgaacgatcagcggcgc
gtggcgaaggtcatcaacttcggcctgatctacggcatgagctcgttcggcctcgcgtcg
aatctcggcattacgcgcgatgccgccaagctttatatcgaccgctatttcgcacgttat
ccgggcgtcgcgcgttatatggacgaaacgcgcttgagcgcgaaagccaagggttatgtc
gagaccgttttcggccgacggctgtggctgccggaaatcaacggcggcaacggtccgcgc
cgtcaggccgccgagcgcgcggcgattaacgcgccgatgcaaggcacggccgccgacctc
atcaagctctcgatgatcgcggtgcagaagtggatcgaggaatcgaacatcggcacgcgc
atgatcatgcaggtgcacgacgaactgatcctcgaagtgccggatgaagaactgtccgac
gtgcgcaagcgtctgcccgagttgatgtgcggcgtcgccgcgctgaaagtgccgctggtc
gcggaagtcggcgcggggctcaactgggaggaagcgcattga
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