Puccinia graminis: PGTG_01086
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Entry
PGTG_01086 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
pgr
Puccinia graminis
Pathway
pgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PGTG_01086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_01086
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PGTG_01086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Ge1_WD40
PAN2_N
Motif
Other DBs
NCBI-GeneID:
10543747
NCBI-ProteinID:
XP_003320174
UniProt:
E3JUN0
LinkDB
All DBs
AA seq
716 aa
AA seq
DB search
METSMNADTRPTSGDGDAQAEEPTAKPSPSSPIASSSTPNKASPIDLRPRMGRKQGWDAW
RPGPYGPPTPPSMEKRLAEESALEMAAMMGHGRQDGRARKIRPRRTVDVGGSMSRWTLMR
SLKTCPDEQYFIRPCIDHLIEFLPPQAYSTNPSTSILTKYVHTSTNKIRCPINIVRFTPD
ARRVLTGATSGEFTLWNALTFNFETILQAHDTAVRALDWSKSGAWLVSGDNNGIIKYFQP
NMNNLQMFEGHKDSIRDISFSPNDSRFVSCGDDGVIKLWGFEERREERNFTGHGWDVKCV
KWHPTKGLICSGGKDSLVKFWDPRIGKCLATLHGHKNSVQACAWNPNGHSIATASRDQLI
KVFDIRMMKELANLRGHKKEVCSLAWHPIHHDLLTSGGSDGSIFYWCLPDSNPIDSLDFA
HDSNVWSLDYHPLGHTLVSGSNDHTTRFWSRGRPGVKIANDRFHVGKERAREMGVKDEEE
QVEDFFVPGLSNQFGHATVGSFFGAGTFGQPSTKDRNMAEMDAQIQIPPALMGGAFGANG
PSVMGLPVPPRPAEAVAMGSGGGSGGQELPSIPGFGRAVDTSDNSLPGLALNSNQINHPP
QNSGWRRGPLPSQEVAMGRDLGGFGGDMGHQQTGKNRWRGNKGNHNQHHRQHQNRWPSNL
QNNHPAQQQQHHHHHHHHPVGGPPGVGPGLGNSNNMHIDEFGREIPHQTSSNNKFK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggagacaagcatgaacgcagatacacgtccaacgagtggggacggagacgcacaagct
gaggagcctacagccaagccatcaccatcttccccgattgcatcatcttccactcccaat
aaagcctcgccgattgacctcagaccacgcatgggtcggaaacagggatgggacgcatgg
aggcctggaccatacggccctccaacacctccgagtatggagaagcgactggccgaagag
agtgcgttggagatggccgcaatgatgggtcacggaagacaggatggtcgtgctcggaag
attagacctcgtaggaccgttgatgtgggaggctcgatgtcacgctggaccttgatgaga
tctttgaaaacttgcccagatgaacagtattttatcagaccttgtatagatcatttgatt
gaatttttaccacctcaggcgtacagcaccaacccgtcgacgtcaattttgacaaaatat
gttcacacatctaccaataaaatacgttgcccaatcaatattgtccggtttacacctgat
gcgaggagggtactgacaggggcgacgagtggcgaatttactctatggaacgcgctgaca
ttcaactttgagacgattctacaagcgcacgacacagccgtccgagcgctggattggtcg
aaatcaggagcctggttggtatcaggagacaacaatggaatcatcaaatacttccaaccg
aacatgaacaatctacagatgtttgagggacacaaggatagcattcgggatatcagtttc
tcgcccaatgatagcaggtttgttagttgtggggacgatggggtaatcaaactctggggg
tttgaggaacgaagagaggagagaaatttcacgggacatgggtgggatgtcaagtgcgtc
aaatggcatccaactaaaggcttgatttgctcaggtggcaaagatagcttggtgaagttt
tgggatccacggatcgggaaatgtttggccactctccacggacacaagaacagcgtgcaa
gcatgtgcttggaatcccaatggacacagtattgcaacagcctcccgggatcagttgatc
aaagtatttgatatccgaatgatgaaagagttagctaatctgcggggacataaaaaagaa
gtttgttctcttgcgtggcatcctatacatcacgatttgttgacttcggggggctcggat
ggatcgatattctactggtgtttgcctgattcgaatcctatcgactcacttgacttcgca
cacgatagcaacgtatggtcactggattaccaccctctgggacacactctcgttagtggt
agcaatgatcacaccactcggttttggagtagaggtagaccaggtgtgaagatcgccaat
gataggttccatgtgggtaaggagcgggcccgggagatgggtgtcaaagatgaggaggaa
caagtcgaagacttctttgtacctggtctcagcaatcagtttggacacgctactgtgggg
agcttctttggtgcaggaacgtttggacagccctcaacaaaagatcgcaacatggctgaa
atggacgcgcaaatccagatacctccggcgctgatgggtggagcatttggggccaacggg
ccttccgtcatgggtttaccggtgccgccccgaccagcagaagcagttgcaatgggtagc
gggggtgggagcggtgggcaagaactaccaagtatacctggattcggacgtgcagtagat
acgagcgacaattcattacccggcttggcgcttaactccaatcaaatcaaccatcctcca
caaaattcaggctggagaagaggcccattgcccagtcaggaggtcgcaatgggacgcgat
ttgggaggctttggtggagacatggggcatcaacaaactggaaaaaatcgatggcgaggc
aacaaaggtaatcataatcaacaccatcgtcaacaccaaaatcgatggccttccaatctc
caaaacaatcatcccgcccaacaacaacaacatcatcaccatcaccatcaccatcctgtt
ggtggcccacctggtgtgggccctggtctagggaacagtaataacatgcacatcgacgaa
ttcggaagagaaatccctcatcaaacttcttcaaataacaaattcaaataa
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