Puccinia graminis: PGTG_03345
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Entry
PGTG_03345 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
pgr
Puccinia graminis
Pathway
pgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PGTG_03345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_03345
03036 Chromosome and associated proteins [BR:
pgr03036
]
PGTG_03345
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PGTG_03345
Chromosome and associated proteins [BR:
pgr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
PGTG_03345
COMPASS/SET1 complex (yeast)
PGTG_03345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
10538099
NCBI-ProteinID:
XP_003321808
UniProt:
E3JZB4
LinkDB
All DBs
AA seq
386 aa
AA seq
DB search
MSSAQTTSGGGGPPKVLLTPELMSSLKMAKIFRTHNAPGSSFTSISFDDRGEHLITTAED
ETLQLFGARNGKHLKQAFSKKYGCSLARFTHKSSAVVHASTKEDDTIRYLSLHDNTYIRY
FKGHKRRVVSLEMSPRDDTVLSGSTDDTVRLWDLRSPSCQGVLNIAGQPCVAFDPSGLVF
AIALNMKQTILLYDLREFDSEPFIARHIEDPVLARISYPPPPPNLFTSLKFSNDGSKLLV
GTAGDVHYVLDAFNGDILARLEGHQGLGYAPPLDSMIPGQSGSSEETTWTPDSRYVVSGS
ADGKVSVWDVQPPKDDPIHAMRAPQSPHATWQPLKIYDGHLGNPTRCVAFNPRLGMLATA
ATELSFWLPGSTDGTNNDHADVEMNT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggctcaaacaacatccggcggcggcggtccacccaaagtattattaacacca
gagttgatgagtagcttgaagatggccaagattttcagaacccataatgcacccggctcc
tccttcacttcaatctccttcgacgatcgcggcgagcacttgatcaccaccgccgaggat
gagaccttgcaactgtttggagctcgcaatggaaaacatctgaaacaggcgttctctaag
aagtacggttgttccctcgcccggtttactcacaaatcatcggccgtcgtccacgcatca
acaaaagaagatgacacgattcgatacctttccttacatgataacacatatattcgatat
tttaaaggacacaaacgaagggtagtatccttggaaatgtccccgcgcgatgatacggtg
ttatctggctctactgacgacaccgtccgattatgggatctacgatcgccttcatgccag
ggagttttgaacattgctggtcaaccttgcgtcgcgtttgatccatctggtctggtcttt
gcaatcgcactgaatatgaagcaaaccatcttactatatgatttacgagaattcgattct
gagccgttcatcgcaaggcatatcgaagatcccgtactggctagaatctcctatccaccc
ccaccacccaatttgttcacctcgctcaagttctccaatgatggatcaaagcttctggtt
gggacagcaggcgatgttcattacgtgttggacgcattcaatggtgatatcttggcgcgg
ctagaaggtcaccagggacttggatatgcgccgcccctagattcgatgattcctgggcaa
tctggatcatcggaagaaaccacatggacgccagacagtcgatacgttgtttcgggaagc
gcggatgggaaggtgtctgtgtgggacgttcagccacccaaggacgacccgatccatgcg
atgcgtgccccccaaagtccgcacgccacttggcagccactcaaaatctacgacggtcac
ttgggcaatccgaccagatgcgttgctttcaaccctcgtctagggatgctggcgacggcc
gcaactgagctttcattttggctgcctggatcaacagatggtacaaacaatgatcatgca
gatgtcgaaatgaatacctag
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integrated database retrieval system