KEGG   Puccinia graminis: PGTG_12168
Entry
PGTG_12168        CDS       T02226                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pgr  Puccinia graminis
Pathway
pgr03030  DNA replication
pgr03410  Base excision repair
pgr03420  Nucleotide excision repair
pgr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PGTG_12168
   03410 Base excision repair
    PGTG_12168
   03420 Nucleotide excision repair
    PGTG_12168
   03430 Mismatch repair
    PGTG_12168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgr03032]
    PGTG_12168
   03400 DNA repair and recombination proteins [BR:pgr03400]
    PGTG_12168
Enzymes [BR:pgr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PGTG_12168
    6.5.1.6  DNA ligase (ATP or NAD+)
     PGTG_12168
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PGTG_12168
DNA replication proteins [BR:pgr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PGTG_12168
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PGTG_12168
DNA repair and recombination proteins [BR:pgr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PGTG_12168
   NER (nucleotide excision repair)
    Other NER factors
     PGTG_12168
   MMR (mismatch excision repair)
    Other MMR factors
     PGTG_12168
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 10540222
NCBI-ProteinID: XP_003330631
UniProt: E3KPH7
LinkDB
AA seq 788 aa
MGAPASSSSNSNGPTKQATLNKFFSKPAGHKPALVQATVNSLFNKQNRKKSEEKEEDTGQ
GHVSRDLKRAPSIDVEEHENPARSSKRAKSNQTKKAEENDDDKDAIKATEEPREEPKPTK
KISKKQSKTKVEEAEELNELKVSNEPIQKKETPVIQQEEHTDEDEEAEELAILDCGDDMN
QQEGGVSWEKGKPIPYSSLAYTFNLIDGTTKRLEITKYLTQYLIQVISRTPDELLKVIYL
CINRLCPDYEGIELGIGESLLIKAIGSFHGVAQIVDHSKDYSQAKKVGIITKLLASCQGE
EAKFIIRSLEGKLRIGLAERTVLVALANAAVRTGVGNKSNSKRKSSSEDLAKDILEGTEI
VKAVFSEIPSYDLVIPALLQGGIKGLRENCKLTPGVPLKPMLAKPTKAISEVLDRFEGHK
FTCEYKYDGERAQIHFLSDGSISIFSRNSENMSVKYPDMVDQLPRAIKKDVTRNFVLDAE
AVAWDRSTKKILPFQELSKRKRKDVKAEEITIQVHIFAFDLLYLNDQPLINTDFSHRRSL
LKEHFNQIEGEFSFATAVDVDNVEEIQTFLEQSVKAGCEGLMVKMLDGQSAHYEPSRRSM
NWLKVKKDYLAGIGDSLDLVVVGAYHGKGKRTAVYGAFLLACYDPETESYQTICKLGTGF
SEEVLDCLHTKLHPLELTVKKNYYDVGESKPDVWFEPKLVWEVLAADLSLSPVYSAAKGL
CGDGTRGVSLRFPRYIKERDDKNGEDATSSEQVAEMYKKQASTVDQAGARNKKKKGKAGQ
DDIEDDFW
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgggcgctcccgcaagctcatcctccaactcgaatggtccgaccaaacaagccaccttg
aataaattcttctccaaacctgctggccataaacctgctctcgtccaggcaaccgtcaac
agtctcttcaataaacagaatcgtaaaaaatctgaagaaaaagaagaagatacaggccag
ggacatgtcagtcgtgatctgaaacgagcaccatccatcgatgtagaggaacacgagaat
ccagcgaggagttcgaagcgcgccaaatcaaatcaaactaaaaaggcggaagagaatgat
gatgataaagacgcgattaaagcaactgaagagcctagggaggaaccgaaaccaaccaag
aaaatctccaagaaacaatcaaaaacgaaagttgaagaagcagaagagttaaacgagctg
aaagtctcgaacgaacctatccagaaaaaagaaacaccggtgatccaacaggaggagcac
actgacgaggacgaggaagctgaagagttagcgattctagattgtggagatgacatgaat
cagcaggagggtggtgtgagctgggagaaggggaagccgatcccatattccagtctagcc
tatacattcaacctgattgacgggacgacaaagcgactcgaaatcaccaaatatctgacc
caatacctgatccaagtgatcagtcggacgcccgatgaactgctcaaagtgatctacctt
tgcatcaaccgactgtgtcccgactacgagggaatcgaactgggtattggcgagtctcta
ctcatcaaagctatcggatccttccatggcgtcgcgcagatagtcgatcactcaaaagac
tattctcaagcgaaaaaagtcgggatcattacaaaattgctggcgtcttgtcaaggcgaa
gaggccaaatttatcatcagatccttagagggtaaactacgaatcggactggctgaacgg
acagtcctagtggctcttgccaatgctgccgtaagaactggtgttggtaacaagtcgaac
tcgaagcgtaaaagctcatcggaggatttggcgaaggatatcctggagggaacggagatc
gtcaaagcagtcttctccgagatcccttcctacgatcttgtgatcccagccctacttcaa
ggaggtatcaaaggactcagagaaaattgtaaattgactcccggggtgccgttgaagcct
atgttggcgaaacctactaaggctatctcggaggtcttggatcggttcgagggccacaaa
ttcacctgtgaatataaatatgatggtgaaagagctcagatacattttttgagtgatgga
tcgattagtatctttagtagaaattcggaaaatatgagtgtgaaatatccggacatggta
gaccaattaccgagagcgatcaagaaagacgtaacgcggaattttgtgttagatgcagaa
gcggtagcatgggaccgaagcaccaagaagatcctaccgttccaagagctaagcaagcgg
aagaggaaagatgtgaaagcggaggagatcacgatccaagtgcacatctttgcattcgac
ttgctctacttgaacgatcagccgttgatcaatacggattttagtcaccggaggagcctg
ttgaaggagcatttcaatcagatcgagggcgaattcagtttcgccactgcggtcgatgtc
gataatgtcgaggagattcagaccttcctcgaacagagcgtcaaggctggctgtgaaggc
ttgatggtcaaaatgttggacggccagagcgcgcattatgaacctagtagaagaagtatg
aattggcttaaagttaagaaagattatctagcagggataggcgattcattagacctagta
gtagtaggagcctaccatgggaaaggaaaacggacggcagtctatggggcctttttactg
gcctgttatgatccggagacggagagttaccagacgatctgcaaattgggcaccgggttc
agcgaggaagtgctcgactgtttgcataccaaattgcaccccttagagctgaccgtcaag
aagaattactatgatgtcggcgagtccaagcctgatgtttggttcgaacctaagctcgtc
tgggaggtcttggccgccgatctaagtctcagtcccgtctatagtgccgctaaaggtttg
tgcggtgatgggactcgaggagtttctctaagattccctcgatacattaaagaaagagac
gacaagaatggcgaagatgccacatcatccgaacaggttgctgagatgtataagaaacag
gcctcgactgtggatcaggccggagctcggaataagaaaaagaaaggtaaagctgggcag
gacgatatcgaggatgatttttggtga

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