Pedobacter ginsengisoli: CPT03_11180
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Entry
CPT03_11180 CDS
T05145
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPT03_11180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_11180
DNA repair and recombination proteins [BR:
pgs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPT03_11180
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPT03_11180
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GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ATP57005
UniProt:
A0A2D1U5Y3
LinkDB
All DBs
Position
complement(2715869..2716486)
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AA seq
205 aa
AA seq
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MNFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVEHFGNAIVRLRKEIKHCSV
CHNISDSHICEICVAPKREKEVICVVEDTRDVMAVENTSQYFGVYHVLGGLISPMDGVGP
SDLFIDSLVQRVATTPVKEIILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGE
LEYADEITLGRSIITRVPYENSLIK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcttctaaattgcttgaggacgctgttaatgaattttcgaagttacctggc
gttggacaaaagacggctttaaggttggttttgcatttattgaataaagagcaggaggaa
gtggagcattttggaaatgcaattgtaaggcttagaaaagaaattaagcattgtagtgtt
tgtcataatatttctgatagtcatatctgtgaaatatgtgtagcgcccaagcgtgaaaag
gaagtgatttgtgttgtcgaagacaccagagatgtaatggcggtagaaaatacttcgcag
tatttcggtgtttatcatgtgcttggagggcttatatctccaatggatggggtagggcca
tctgatcttttcatcgattcacttgtgcagcgtgttgctacaactcctgtaaaagagatc
atacttgcgcttagtgcaaccatggaaggcgatactacactcttttatttgtataaacgg
cttaaagattttcaaataccaattactacaattgccagagggattgcctttggtggagag
ctggagtatgctgatgagattacactgggaaggtctatcattaccagggtgccttatgaa
aactcattaattaaataa
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