Pedobacter ginsengisoli: CPT03_19480
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Entry
CPT03_19480 CDS
T05145
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgs03021
]
CPT03_19480
03009 Ribosome biogenesis [BR:
pgs03009
]
CPT03_19480
Transcription machinery [BR:
pgs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CPT03_19480
Ribosome biogenesis [BR:
pgs03009
]
Prokaryotic type
rRNA transcription factors
CPT03_19480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
KH_1
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
ATP58488
UniProt:
A0A2D1UA31
LinkDB
All DBs
Position
4645299..4646534
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AA seq
411 aa
AA seq
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MSNINLIDSFQEFKDFKNIDRPTVISVLEEVFRSMLRKKYGTDENCDVIVNPDNGDLEIW
RTRKVMEDGFSEDDDLEIELAEVKQLDPDMEVGDDYIEQITLESFGRRAILAARQTLVSK
VLELEKDEIFKKYKDRVGEIVTGEVYQVWKKETLVLDDEGNELMMPKTEQIPADYFKKGD
TVRAVILKVDMVNSTPKIIISRIAPEFLQRLFEIEVPEIFDGLITIKKIVREPGERAKVA
VESYDDRIDPVGACVGMKGSRIHGIVRELKNENIDVINFTNNISLYITRALSPAKITSIK
LDDETKHASVYLKPDQVSLAIGRGGHNIKLAGKLTGYEIDVYREAGEEDEDVDIEEFSDE
IDSWIIDELKAIGCDTAKSVLALSVDELVKRTDLEEETIKEVMSILKSEFE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatattaatttaatcgattcatttcaggagttcaaggactttaagaacatcgac
cgccctacagtgattagtgtgctggaagaggtatttcgcagtatgttgcgtaaaaaatat
ggtactgatgagaattgtgacgtaattgttaacccggataacggagatttagagatctgg
cgtaccagaaaagtgatggaagatggcttttctgaggacgatgatttagaaattgaactt
gctgaggttaaacagttggatccggatatggaagttggcgacgattacattgagcagatc
actttagagagttttggaagaagagctattttagctgcccgccaaactcttgtttcaaaa
gtattagaacttgaaaaagacgaaatctttaaaaaatataaagacagggttggtgagatt
gtaaccggagaggtttaccaggtttggaaaaaagaaacactggttcttgatgatgaaggc
aacgaattaatgatgcctaaaactgaacagatcccggctgattatttcaaaaaaggtgat
accgttcgtgccgtaatccttaaagtggatatggtgaacagcactccaaaaattattatt
tccagaattgcccctgagtttttacagcgcttattcgaaattgaagttcctgagattttt
gatggtttaattaccattaagaaaattgttcgtgaaccgggagaaagagctaaagttgct
gtagaatcttacgatgatagaattgatccggtaggagcttgtgtgggtatgaaaggttcc
cgtatacatggtattgttagagagcttaaaaatgaaaatattgatgtaattaactttacc
aataacatttcattatatataaccagagcgctaagccctgcaaaaatcacctctattaag
ttagatgatgaaacaaaacatgcttcagtttacttaaaacctgatcaggtttcgttggca
attggtcgcggtggtcataacattaaacttgccggaaaattaaccggttatgaaatagat
gtataccgtgaagctggtgaagaggatgaggatgtggatattgaagaattctcggatgag
atcgatagctggatcatcgatgagctaaaagctatcggatgtgatactgctaaaagtgtg
ttagcactttccgttgatgaattggttaaacgtaccgatttggaggaagaaaccatcaag
gaagtgatgagtattttgaaatcagaatttgaataa
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