Pedobacter ginsengisoli: CPT03_21540
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Entry
CPT03_21540 CDS
T05145
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPT03_21540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_21540
Transporters [BR:
pgs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CPT03_21540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
AAA_22
Pox_P21
AAA_21
MMR_HSR1
AIG1
DUF1372
AAA_29
DUF815
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ATP58867
UniProt:
A0A2D1UB66
LinkDB
All DBs
Position
5097971..5099743
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AA seq
590 aa
AA seq
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MSKITGDVINVGLLKRVFQYVKPYQRIFIISVILTVLLAALAPLRPILIGYTLDHHIITG
DYSGLLNMTILMLVLLVIQTGVQYSHTLLTNTLGQSAIRDLRIDVFNHITKLRLKYFDNT
PIGQLITRTVSDLETIAEIFSEGLIVIIGDILMVIVIIGVMVYEDWALTLVVLLPMPLLI
IATSIFQKAIKSAFQEIRTEVSNLNTYLQEHITGVSIIQYFARERQEYNKFLKINGRYRD
ANIRSNWYYSIFFPVVEIISAMSLGLLVWYGAKTILNNPAIKPGIITEFIMYIGMLFRPI
RELADKFNTLQMGMVGAERVFKVLDTNEITDNKGTYAPELMKGNISFEKVWFAYNEENYV
LKDISFEVETGKTIALVGATGAGKSSTINILNRFYEIQKGEIKVDGIKIQDYELSYLRNK
IATVLQDVFLFSDTIFNNITLNNDAITMEEVIDAAKKVGAHDFIERLPGGYQYNVMERGA
TLSAGQAQLISFIRALVYNPAILVLDEATSSVDTETEMLIQRAIENLMKGRTSIVIAHRL
STIQKADKILVLEKGEIKEMGTHQQLLKLDGYYKKLYDLQFNSTGISTSV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaataaccggtgatgtcattaatgtagggttgttgaaaagggtttttcaatat
gtaaagccatatcagcgtatttttataatctcagtaattcttactgtacttcttgccgca
cttgccccgttacgcccaattcttattggatatactttggatcatcatattattaccgga
gattatagtggattgctgaatatgaccattctaatgcttgttctgcttgttattcaaaca
ggtgtacagtacagtcataccttacttacaaacactttgggacaatctgcaattcgtgat
ttaagaatagatgtatttaatcatattactaaattgcgtttaaagtatttcgataataca
cccattggccagttaattaccagaactgtttctgatcttgaaaccattgccgaaattttc
tcggaaggtttaattgtgattattggcgatattttgatggtaattgtaattataggtgta
atggtgtatgaagactgggctttaacgcttgtggttttgttacccatgccattacttatt
attgcaacttctattttccagaaagcaattaaatctgcctttcaggaaattagaacagag
gtgtctaatctgaatacttatttgcaggagcatattaccggggtgtcaattatccaatat
tttgcaagggagagacaagaatataacaagtttttgaaaattaatggccgttatagggat
gctaatattcgctctaattggtattactctatattttttccggttgtagaaattatttct
gccatgtctttaggattattggtgtggtatggtgcaaaaacaattcttaataatcctgct
attaaaccaggtattattactgagtttattatgtatatcggtatgcttttcagaccaatc
cgagagctcgcagataagtttaatacgctgcaaatggggatggttggtgccgaacgggta
tttaaggttttggataccaatgaaattactgataacaaaggcacatatgctcctgaatta
atgaaaggtaatatttcttttgaaaaggtatggtttgcttataatgaagagaattatgtg
ttaaaggacatttcctttgaggttgaaacaggtaaaactatcgctcttgttggggcaaca
ggggctggtaagtcttcaacaataaatatcctgaaccgtttttatgaaattcaaaaggga
gagattaaagttgatggaataaagatacaggattatgaactgagctatttgaggaataaa
attgccacagtattgcaggatgtttttcttttttcagatactatctttaataacataacc
cttaacaatgatgcaattacaatggaggaagtgattgatgctgccaaaaaagttggcgct
catgattttattgaaagattgccaggaggatatcagtataatgtgatggagcgtggagct
acattatctgcaggacaggcgcaactcatatcttttatcagggcattggtttacaatcct
gctattcttgtacttgatgaggcaacatcttctgtagatacagaaacagaaatgcttatt
cagcgtgctattgagaatttaatgaaaggccgtacatctattgtgattgctcaccgcctt
tcaactatacagaaagcagataaaattcttgttcttgaaaaaggtgagattaaggaaatg
ggtactcatcagcaattacttaaactcgatggttattataagaaattgtatgacttgcaa
tttaattctactggtatttctacctctgtataa
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