Porphyromonas gingivalis TDC60: PGTDC60_0617
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Entry
PGTDC60_0617 CDS
T01516
Name
(GenBank) putative glycosyl hydrolase
KO
K07405
alpha-amylase [EC:
3.2.1.1
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00500
Starch and sucrose metabolism
pgt01100
Metabolic pathways
pgt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PGTDC60_0617
Enzymes [BR:
pgt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
PGTDC60_0617
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_57
Polysacc_deac_1
DASH_Spc34
DUF16
Trimer_CC
Motif
Other DBs
NCBI-ProteinID:
BAK24786
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All DBs
Position
complement(645634..646920)
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AA seq
428 aa
AA seq
DB search
MKHICLYFQIHQPFRLKRYRFFDIGNDHYYYDDFRNEEIMRRITQKCYLPANLLLKEIIA
EHPEFRVAFSISGTALEQLESYSPEALDTFRDLAETGCVEFLAETYAHSLSSLYDPEEFY
NQTMIHSRRMEELFGVKPRVLRNTELIFSDNIATQVAEMGFQGMLTEGAKHILGWKSPNY
LYKAGSAPELSLLLRNPRLSDAISAMFTRYDWNEYPLTADKMIRWIEETPEEEQIFNLFM
NYEVLGSLHPQESGIFDFFRALPSLAKKSEGVKFATPSELIESYSPVAKFSSIYPISWVG
EEKDTGTWLGNVLQQGACDKLEQWGERVRMIDDQRMLQDWLYLQSADHFYYMKTRGGDAG
NFSPYETPYDAFNNYMNVLSDFLLRVEARYPSTIENEELKALLTTIRNQDKQIKKLEETI
KRQKTKTT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatatctgcttatacttccaaatacatcagccgtttcgtctgaaacgataccga
tttttcgacatcgggaacgaccattactactacgacgactttcgcaatgaagaaatcatg
cgacggatcacacagaagtgctatctgccggccaatctgcttttgaaggaaatcattgcc
gaacatcccgagtttcgagtagcattttctatttccggtactgctttggaacagctggag
tcctattcgccggaggccttggacaccttcagagatttggccgaaacgggctgtgtagag
tttctggccgaaacctacgctcattccctctcgtcgctctatgatcccgaagaattttac
aatcagacgatgatccatagtcgtcggatggaagagctgttcggtgtaaaaccccgagtg
ctgcgcaatacagagttgatcttctccgacaacattgccacccaagtggcagaaatgggt
tttcaagggatgctcacggaaggagccaaacacatactcggatggaagagtccgaactat
ctgtacaaagccggatccgctccggagttgtccctcttgctccgcaatccgaggctgagc
gatgccatcagtgccatgttcacccgctacgactggaacgaatatcccctgacggcagac
aagatgatccgttggatcgaagagactcccgaagaggagcagatattcaatctcttcatg
aactacgaagtcttgggatcgctccatccgcaggagtcgggtattttcgatttctttcgt
gcactcccttctttggcgaaaaagagcgaaggagtcaagttcgctacgccatcggagttg
atagagtcctacagccccgtagccaagttctcctccatctaccccataagctgggtagga
gaagaaaaagataccggtacgtggctgggcaatgtgctgcaacaaggagcatgcgacaaa
ctcgaacaatggggcgaacgtgtacgtatgatcgacgatcagcgtatgctacaggactgg
ctctatctacagagtgccgaccacttctactatatgaaaacccgtggcggagacgccggc
aacttcagcccgtacgaaacgccttacgatgctttcaacaactatatgaatgtgctcagc
gacttcctgcttcgcgtagaagcccgctacccttctacgatagaaaatgaagaactgaaa
gccttgctgactacaatcagaaatcaggataaacaaatcaaaaaattagaagagacaatc
aaacgtcaaaaaacgaaaacaacatga
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