Porphyromonas gingivalis TDC60: PGTDC60_1850
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Entry
PGTDC60_1850 CDS
T01516
Symbol
ddl
Name
(GenBank) D-alanyl-alanine synthetase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00470
D-Amino acid metabolism
pgt00550
Peptidoglycan biosynthesis
pgt01100
Metabolic pathways
pgt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGTDC60_1850 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PGTDC60_1850 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PGTDC60_1850 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgt01011
]
PGTDC60_1850 (ddl)
Enzymes [BR:
pgt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PGTDC60_1850 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
pgt01011
]
Precursor biosynthesis
Amino acid ligase
PGTDC60_1850 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
GARS_A
ATP-grasp
CPSase_L_D2
ATP-grasp_4
TTL
ATPgrasp_ST
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
BAK25999
LinkDB
All DBs
Position
complement(1919507..1920502)
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AA seq
331 aa
AA seq
DB search
MMKKPIVAVIAGGYSGEHSVSLKSAAGILSWLGSEPFSTFLVLIERDRWSVRVSEQREVP
LDKNDFSFDLDGERIRFDYAYITIHGTPGENGLLQGYLDMIGIPYNTGDTLVESLTFNKY
VCNRFLSGFGIRIADSMRLTGRDTQPDVADLIARMGLPLFVKPNVGGSSIATTKVVEAAQ
LLPAIEQAFSEGEEVMIERLICGTEVTCGAFLRKKEVVALPVTEVVAHNEFFDFDAKYNG
AVEEITPARISDEATRLIQTMTARIYELLNARGIIRVDYIIEADGIPTLLEVNTTPGMTP
TSFIPQQVRAAGMDMKEVLCTIIRDGLNETQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaccaattgtggctgtcattgcaggcggttattcgggcgaacattcggtt
tcgctcaaaagtgctgccggcattctgtcctggctgggaagcgagcctttctccaccttt
cttgttctgatcgaacgtgatcgctggtcggtaagagtatcggagcagagagaggttcca
ctggataagaacgatttcagctttgatctcgatggcgaacgaatacggtttgactatgct
tatatcaccatacatggaactccgggagagaacggtctgcttcaggggtatctcgacatg
atcggcatcccatacaatacgggtgatacgctcgtcgaatccctgactttcaacaaatat
gtgtgcaatcgttttctctccggcttcggtatccgcattgccgattctatgcgactgacc
gggcgagatactcagcccgatgtggcggatctgatagcacgtatggggcttcctcttttc
gtgaaacccaatgtgggaggttccagcatcgcgactaccaaggtggtggaagctgcacag
ctccttccggcaatagaacaagccttctcggaaggcgaagaggtaatgatagagcgtctg
atatgtggtaccgaggttacctgcggggcattcctcagaaaaaaagaagtggtcgcattg
cctgttacagaagttgtcgcacataatgagtttttcgacttcgatgccaaatacaacgga
gctgtagaggaaatcacaccggcgagaatcagcgatgaagccactcgattgatacagacc
atgactgcgcgcatatacgagcttctcaacgctcggggcatcatacgtgtggactatatc
atcgaagcggatggtattcccacgctgctggaagtgaacacgacaccgggcatgacccct
acgagctttatcccccagcaggttcgagcagccggaatggatatgaaagaggtgctttgc
actatcattcgggatggactgaatgagacccaatag
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