Pantherophis guttatus (corn snake): 117675658
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Entry
117675658 CDS
T07329
Symbol
CACNA1F
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04010
MAPK signaling pathway
pgut04020
Calcium signaling pathway
pgut04260
Cardiac muscle contraction
pgut04261
Adrenergic signaling in cardiomyocytes
pgut04270
Vascular smooth muscle contraction
pgut04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117675658 (CACNA1F)
04020 Calcium signaling pathway
117675658 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117675658 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
117675658 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
117675658 (CACNA1F)
04270 Vascular smooth muscle contraction
117675658 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgut04040
]
117675658 (CACNA1F)
Ion channels [BR:
pgut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117675658 (CACNA1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
FAM176
HemY_N
DUF4834
Motif
Other DBs
NCBI-GeneID:
117675658
NCBI-ProteinID:
XP_034290450
UniProt:
A0A6P9DGN6
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSKSECNGGPLGSPEAPHQSAATAFVEASGQAIAWTLTSGGSDTLGSTGSLAQKKRQQQN
KHKTQSSNVVHRSPRALFCLHLNNPIRRAAISIVEWKPFDILILMTIFANCVALGVYIPF
PEDDSNVSNHNLEQVEYIFLIIFTVETFLKILAYGLVMHPSAYIRNGWNLLDFVIVVVGL
FSVILEQVSHKPGEAHHMSGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKAMV
PLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFIIDSDLEAEEDPSPCAFSGHGRECTVN
NSECRGRWDGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAVGHELPWVYFVSL
VIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLKGYLDWIMQAEDIE
PDEEKDETSEKHTYVTVANLMEKKRKKKWFRHRSHSSDSHTSLPASESTSVNTENVEDEE
HLQSHCYDVCLRKLSKTKFGRHVQRINRLFRKKCRLAVKSVSFYWMVLLLVFLNTLTIAS
EHYRQPYWLTQIQAYANKVLLSLFTLEMLLKMYSLGLQAYFVSFFNRFDCFVVCGGILET
VLVEFEIMQALGISVLRCVRLLRIFKITRHWASLSNLVASLLNSMKSIASLLLLLFLFII
IFSLLGMQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPY
FPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADGDDINSSKEEKQAPAEGEQNKEEEK
KTVKVEGGEEEEEEEEEEEVAVEEGNEGAGEEEVADQQSLAESHLDKLEDTPKEKVVPIP
DGSAFFCLSQTNPLRVGCHKLIHHHIFTNLILVFIILSSISLAAEDPIRAHSFRNNILGY
FDYAFTSIFTVEILLKMTSYGAFLHKGSFCRNWFNLLDLLVVSVSLISFGIHSSAISVVK
ILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKF
FSCTDEAKHTPVECKGTFIVYKDGDVAHPMVRERMWLNSDFNFDNVLSGMMALFTVSTFE
GWPALLYKAIDANAENQGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQ
EYKNCELDKNQRQCVEYALKAQPLQRYIPKNKYQYKFWYMVNSTCFEYIMFVLILLNTIA
LAVQHYEQSEPFNNVMDLLNMVFTGLFTVEMFLKIIAFKPKHYFVDAWNTFDALIVVGSI
VDIAVTEINSSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALL
IAMIFFIYAVIGMQTFGKIAMQDSTAINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASL
PGKRCDPESDFEPGEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSI
LGPHHLDEFKRIWSEYDPAAKGYIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNM
PLNSDGTVTFNATLFALVRTSLKIKTEGDLDMANRELRAVIKKIWKRTKPKLLDEVLPVA
EGEEITVGKFYATFLIQDYFRKFRKRKEKGLLGPDGSPSNSSALQAGLSYLQDLGPEIRR
AISCDLERKEEEEEEEEVEEKIIEEETAIYKSSELYSEAPEHHAAVAETPTEQEDKTMAS
QHLSKTSSSHVLNGLKPYEENISGSDEPADLPVVSIQRRINRQRSSFPPTVEEVVNHTDV
CVEDTSAEQGNYSREEDSENLPPHNKQPHLHNPQSHQHHWQSGYAGSLPLLSHPVNSRLG
KGVLDGRQIKRRRLLPATPAGHKPAFNIQCLQRQDSCDDIPIPGTYHQKAPLGRTHAQSH
QGYGKYSSWHSGSRTSTSSSQSWATPPKRGRLLYAPLILVEEERVPGYSWEKNSSSLPPM
SQAHWYRNEAELTCHTYGSLKVPSPLRHSSGGRSGSADSLVEAVLISEGLGMYAQDPNFV
AFTKREIADACHMTLDEMESAATDLLSRKSAGGDSSNRGGGSHLLYSSDGEHSGAESLGL
VYSDEESFRSHEEEDLADEMICITTY
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcggagtgcaatggaggacctttgggctctccagaggcaccacaccaatca
gcagccacggcttttgtggaagcatcaggccaggccatagcatggacgcttacgagtggg
ggttcagatactttgggctctactggcagccttgctcagaagaagcgtcagcagcagaac
aagcataagacccagagctccaacgtggtgcaccgttcaccacgagccctcttctgtcta
catttgaacaatcccatccgcagagctgctatcagcatagtagagtggaaaccttttgac
atcctcatccttatgacaatctttgccaattgtgtggccttaggagtctatattcccttt
ccagaggatgattccaatgtctccaaccacaatttggaacaagtggaatatatttttctc
atcatcttcacagtggaaactttcctcaagatccttgcctatggtctggtcatgcatcct
agcgcctatattcgcaatggctggaatcttcttgattttgtcattgttgtagtgggtctc
ttcagtgtcattctggaacaagtctctcacaagcctggggaggcccatcacatgagtggg
aagccaggtggctttgatgtcaaagccctgcgagcttttcgtgtcctgcgacctctgcgt
ctggtctctggtgtccctagtctgcatattgtcttgaattctatcatgaaagccatggtg
ccccttctgcacatagcactactagttctttttgtcatcatcatctatgccatcattggc
ttggagctcttcattggtcgcatgcataagacctgcttcatcattgattcagatctggag
gctgaggaagacccgtcaccttgtgctttttctggacacggtcgggaatgcacagtaaac
aatagcgaatgtcgtggcaggtgggatggacccaatggtggaatcaccaattttgacaac
ttcttttttgccatgcttactgtcttccaatgcattaccatggaaggttggactgatgtt
ctatactggatgcaagatgcagtgggtcatgaactaccgtgggtttattttgtcagcctt
gtcatctttggctctttctttgtgcttaatctggttttgggtgtgttaagtggggaattc
tctaaggaacgagagaaggcaaaagcccggggagacttccaaaagctacgagaaaaacaa
cagatggaggaagatttgaagggctatctggattggatcatgcaagcagaagacattgag
cccgatgaagaaaaagatgagacaagtgaaaagcatacttacgttactgtggccaacctg
atggaaaagaagaggaagaagaaatggttcaggcatagaagtcattcctccgacagccac
accagtcttcctgccagcgaaagtacctcggtcaacacggagaacgttgaagatgaagag
caccttcagagccactgctatgatgtgtgtttacgaaagctttccaagacaaaatttggc
cgccatgtacagcgtatcaaccgactttttcggaagaagtgtcgtttggctgtcaaatct
gtctctttctactggatggtcctgctccttgtgtttctgaataccctcaccattgcttct
gaacattacaggcagccttattggctcacccaaatccaagcttatgctaacaaagtactg
ttgtcactgttcaccctggagatgctgctgaagatgtacagcctaggcctccaagcctat
tttgtcagcttcttcaaccgttttgactgttttgtggtatgcggtgggattttggagact
gtcctggtagaattcgagatcatgcaagcccttggaatctctgtgctccgttgtgtccgc
ctcctgcgaatcttcaaaataaccaggcattgggcctcactgagcaaccttgtggcttct
ttgctgaattccatgaagtccattgcttccttacttctactgctgttcctcttcattatc
atcttctccttgctaggcatgcaactctttggtggcaaatttaactttgatgagactcag
accaaacgcagcacctttgacactttcccccaggccttgctcactgtcttccagatactg
acaggagaagattggaatgcagtgatgtatgatggaatcatggcctacggtggcccctat
tttcccggcatgctggtctgcatctatttcattattctctttatttgcggcaactatatc
ttactcaatgtcttcttggctattgcagtggacaatcttgctgatggggatgatattaat
tcctccaaagaagagaaacaggcaccagcagagggagaacagaacaaagaggaagagaag
aaaactgtgaaggtagaaggtggggaggaggaggaggaggaggaggaggaggaggaggtg
gctgtagaagaaggcaatgaaggagcaggagaggaagaggtggcagatcagcagagtttg
gcagagtcccacctagacaaactggaagacactcccaaggagaaagttgtaccaattcct
gatggaagcgcctttttttgccttagccagacaaacccccttcgtgttgggtgccacaag
ctgatccaccatcacatcttcaccaatctcatccttgtcttcatcattcttagcagcatc
tctttggcagctgaagatcccatccgagcccactccttccgcaacaatattttgggctac
tttgactatgccttcacgtctatcttcactgttgagatcttgctcaagatgacttcatat
ggtgccttcctgcacaagggctcattctgccggaactggtttaatctcctggatctgctt
gttgtcagtgtctcactcatctcctttggcatccactccagtgccatctctgtggtgaag
atcttgcgggtactaagggtactccgtcctctccgagccatcaaccgagccaaagggctg
aagcacgtggtacaatgtgtgtttgtagcaatccgcaccattggaaatatcatgattgtc
accaccttgctgcagttcatgtttgcttgcattggcgttcagttattcaagggcaaattc
tttagctgcacagatgaggccaagcataccccagttgagtgcaaaggcacattcattgtg
tacaaggatggggatgtagctcacccaatggtgcgtgagcgcatgtggctcaacagcgac
ttcaactttgacaatgtgctgtcaggcatgatggctctcttcactgtctccacttttgag
ggatggccagcgctcttgtacaaagctattgatgccaatgcagaaaaccaaggaccaata
tacaattaccgggtagagatctccatattcttcattgtctacatcatcatcattgctttc
ttcatgatgaatatctttgtgggctttgtcatcatcactttccgggcccaaggagagcag
gaatacaaaaactgtgagctggacaagaaccagcggcaatgtgtggaatatgccttgaag
gctcaacccttacaacgttatattccaaagaacaaatatcaatacaaattctggtatatg
gtcaattccacttgttttgaatacatcatgtttgtactgatcttgctgaacactattgct
ttggctgtacagcactatgaacaatcagagccttttaataacgtgatggatctgctcaat
atggtgttcacaggcctcttcaccgttgaaatgtttctgaagattattgccttcaagccc
aagcactactttgttgacgcatggaatacctttgatgctctgattgtggttgggagtatc
gtagacattgctgttactgaaatcaacagctcagaggacagttcccgtatctctatcacc
ttcttccgccttttccgtgtcatgcgcctggtcaagctcctcagcaaaggtgaaggtatc
cgtaccctcctctggactttcatcaaatctttccaggctttgccatatgtggccctcctc
attgccatgattttctttatctatgcagtcatcggcatgcagacctttggcaaaatagct
atgcaagatagtacagccatcaatcgcaacaataatttccagacctttccacaagctgtg
ttgctgcttttcaggtgtgccacaggggaagcctggcaggagatcatgctggccagcttg
cctggcaagcgctgtgaccctgagtctgattttgaacctggggaggaattcacttgtggt
agcaactttgctattgtctatttcatcagcttcttcatgctgtgtgccttcttgatcatt
aacctctttgttgctgtcatcatggacaattttgactatctcactcgggactggtccatt
ctgggtccccaccacctcgatgagttcaagaggatctggtcggaatatgatccagctgcc
aaaggttacatcaagcatctggatgtggtgaccctattgcgccggatacagccacctctg
ggttttgggaagctctgtccccaccgagtagcctgcaaaaggctggtggccatgaacatg
ccattgaactcagatggaactgtcactttcaatgccactctctttgctctggtgcgtaca
tcactaaagatcaagacagaaggagacctggatatggccaatagggaactccgtgctgtc
atcaaaaagatctggaaacggactaagcccaaattactggatgaggtgttacctgttgca
gaaggggaggagataaccgtaggaaaattctatgccacattcctgatccaagattatttc
cgtaaattccgtaagcggaaagaaaagggactgcttggaccagatgggtccccaagcaac
tcctccgccttgcaggctggactgagctacttacaagatctagggcctgagatccgcaga
gcaatatcttgtgacctggaaagaaaagaggaggaggaggaagaagaagaagttgaggag
aaaatcattgaggaagagacagccatttacaagagttctgagttatatagtgaagcccct
gagcaccatgccgcagttgctgagactccaacagaacaagaagacaagactatggcctct
cagcacctctctaagaccagctcctcccatgtgttaaatgggctgaagccctatgaagag
aacattagtggcagtgatgagcctgctgacttgcctgttgtttccattcaacgcaggata
aacaggcaacgttccagtttcccaccaacagtagaagaagtagttaaccacactgatgtt
tgtgtagaggacacctcagctgagcagggaaactatagccgggaggaagactctgaaaac
ctgccgcctcataacaagcagcctcatctgcacaaccctcagtcccaccagcatcactgg
cagagtggctacgcgggctctctgcctctgctctcccatccggtcaacagcagactcggc
aaaggagtactggacggcaggcagatcaagcgccggcgcctcttgcctgccactcccgca
ggccacaaaccagccttcaacatccagtgcctgcagcgtcaagacagctgcgatgacatc
cccatcccaggcacctaccaccaaaaggcaccactgggccgaacacatgcgcagtcccat
cagggctatggcaagtatagctcatggcacagtggcagccgcacttcaacatcttcctcg
caatcttgggccacgcctccaaaacggggccggctgctctatgctccgctcatcctagtg
gaggaggagagggtgccaggatacagctgggaaaagaatagcagcagccttccacccatg
tcgcaggcccactggtacaggaatgaagccgagctgacctgccacacctatggaagcctc
aaggttccaagcccactccggcacagctccggtggaagatctggcagcgcggacagtctg
gtggaggcggtgctcatctccgaaggcctaggcatgtatgcacaggacccaaattttgtg
gcctttaccaagcgggagattgctgatgcctgccacatgactctggatgaaatggaaagt
gctgccacggacttgttgagtcgcaagtctgctggtggtgatagtagcaaccgaggtggt
ggaagccaccttctgtatagcagtgatggggaacatagcggagctgagagtctaggcctt
gtttatagtgatgaagaaagcttccgttcccatgaggaagaggacttggctgatgagatg
atctgcatcaccacttattga
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integrated database retrieval system
