Pantherophis guttatus (corn snake): 117676531
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Entry
117676531 CDS
T07329
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X1
KO
K16630
collagen type XXII alpha
Organism
pgut
Pantherophis guttatus (corn snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
117676531
NCBI-ProteinID:
XP_060537802
UniProt:
A0A6P9D734
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MPPVGRYLITSILALLLLWGGEKIKAHRAGCKNVHYDLIFLLDTSSSVGKEDFEKVRQWI
AHLVDTFEIGPDKTRVGVVRYSDQPATEFDLGSYGTQQEIKEAAKGIKYYGGNTNTGDAL
RYINSYSFSAQAGGRPNDNAIKKVVILLTDGRSQDYVLSPATAAHKAGIRIFAVGVGDAL
KEELDEIASEPKSAHVFHVSDYNAIDKIREKLRRRLCENVLCPNVHVEGDRFRHTNGEMD
DIPGFDLMELFSVREIFRMKDDGIQSSYVRLGSFPIVQRTQDVFPQGLPDEYAFVATFKF
RKSSRREDWYIWQIIDKYGIPQVSIRLDGENKALEYNAIGLTRDAVRVVFRNGPVNDLFD
RNWHKIALSIQSQTVSLYIDCKLVQTLPIEDRENIDIQGKTVIGKRLYDSVPIDFDLQRM
VIYCDSRHAELETCCDIHSGPCQVTIVTDVPPTVIPPTVGNEHVGPTKTVNCSCPPGEKG
ERGLPGFEGLRGQKGDIGPVGPSGPKGDKGEPGGETFGRAEKGQKGEKGPQGLPGLMGER
GEKGSIGTAGVPGSDGAKGETGEPGLPGATGLPGPSGPKGEEGGSGPPGRQGYVGAPGLQ
GERGEKGPRGDKGERGLDGFPGKAGLDGKQGAKGSPGQPGPVGLQGEKGDIGPPGKPGSA
VQIEGLKGEQGAPGPRGPMGPPGTPGTPGSPGSEGKMGPPGLQGLRGKKGEVGLAGVDGL
PGPSGPPGPPGIVGSPGLDGSPGQPGETGRKGESGPPGLPGKSGQDGLPGLPGSKGEQGE
RGEVGKAGSKGESGPPGPSGIVGERGEAGLPGPPGLPGPRGEKGSQGDKGRAGLTGFKGD
RGEKGEIGAPGLPGQPGKTTPFTPRPSIPGEQGPKGEKGDRGERGEPGEQGVPGEQGPIG
PAGQQGLKGQEGEVGQPGPPGEIGPPGPEGPSGPRGLPGNVGIPGADGQPGIDGEKGEKG
EPGKEGKSGPPGPTGEPGAVGEPGLPGKGRDGERGERGPPGLPGSFGPKGDRGAPGVPGQ
PGDRGAPGVGLSGPLGPVGPPGDKGPPGPRGLPGIQGPPGQTGHDGLPGNPGERGPPGKT
GPTPLLNPDDIRLLVKDVCTDCPPGPSGLPGIPGQKGDKGLRGPPGNDGPVGKRGEPGLR
GPPGPPGAEGPKGPKGGDGASGEAGLKGEQGHPGIPGFTGPPGNPGPAGPEGSPGPIGSP
GPPGEVGKEGPPGPQGPPGLLGLMGVPGKDGKDGKPGSPGEPGKPGEPGLPGQEGARGPP
GFKGPIGDAGNPGMRGEPGQPGTPGREGLSGKDGDPGPAGPEGPRGIRGLAGKTGPPGAP
GEPGPAGNPGSKGSKGETGSPGVPGFIGPRGLPGEPGEKGVPGKEGTSGSPGEHGQKGDR
GDPGTKGEKGPAGVKGPPGDPGVPGRKGHTGLMGPSGPSGESGQVGPPGPPGQPGFPGPR
GDPPSTETLRRLIQEELGKQLDARLPYLISQLQPSQIKAPQGRPGPPGSPGKEGLPGRVG
PPGEPGRPGQPGSEGPLGPMGPKGVRGEKGEKGDAGIGQRGETGPPGVAGVPGEPGYGKD
GVPGVQGAQGEAGTPGLMGPPGPPGANGQCDPSQCAYYASFAARPSNVKGP
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctgtaggaagatacttgatcacttccatcttggcgctacttcttctctggggt
ggagagaagattaaagctcacagggcaggttgtaaaaatgttcactatgacttgatcttc
ttgctggacacttcctccagcgtgggcaaagaagactttgagaaggtccgccaatggata
gcccacctggtggacacttttgagatcggaccagacaaaacccgtgttggggtcgtccgg
tacagtgatcaaccagccactgagttcgaccttggaagttatgggactcagcaagagatc
aaagaagctgcaaagggcatcaaatactacggagggaacacaaacactggagatgccctg
cggtacatcaatagttacagtttttccgcacaggccggtgggaggccaaatgataacgcc
atcaagaaagttgtgatcctcctgacggatggcaggagccaagattacgtcttgagtccg
gccacggcagcgcataaggccggcatccggatttttgcggtgggtgtcggggatgccctt
aaagaagaactggatgaaattgcttctgagccaaaatcggcccacgtcttccatgtctct
gattacaacgctattgataagatacgggagaagctgagaagaaggctttgcgagaatgtc
ctgtgtccaaatgtccacgtagaaggagacaggttcagacacaccaatggagaaatggat
gacataccagggtttgacttgatggaattattcagtgtacgggagatattccgaatgaaa
gatgatggaatccagagctcttatgttcggctaggaagttttcccatcgttcagcgaaca
caagatgtcttcccacaagggcttccggatgagtatgcttttgttgccactttcaaattc
cgcaagtcatccaggcgagaagattggtacatttggcagatcattgacaaatatggcata
ccacaggtttctatccggttggatggggagaacaaagccttggagtacaatgcaattgga
ctcaccagagatgctgtgagagtcgttttcagaaacggacctgtcaatgacctgtttgat
cgtaactggcataagattgcactgagcatccagtcccagacggtctccttgtacatcgat
tgcaaactggtccagacattacctattgaagacagagaaaatattgacattcaagggaaa
acggtgatcggcaaacgcctttatgacagtgtgccaattgatttcgaccttcagcggatg
gttatttattgtgattcacgacatgccgagcttgaaacctgctgtgatattcattctgga
ccttgtcaagtgaccatagttacagatgttccccctactgtaattccaccaactgttgga
aatgagcatgttggacctaccaagacagtcaactgttcctgtcctcccggagaaaagggg
gagagaggccttcctggatttgaaggattgagaggacaaaagggagacattggaccagtt
ggaccttctggcccaaaaggagacaaaggagaaccaggtggggaaacatttggacgagca
gaaaaaggacaaaagggtgaaaagggaccccaaggtttacctggcttaatgggcgagaga
ggagaaaagggttccattggtacggctggcgtcccagggagcgatggagccaaaggagaa
actggagaacctggtcttcctggagcaactggccttcctggaccatctggcccaaaggga
gaagaagggggttcaggtcccccaggacgtcaaggttatgttggagcacctggtttgcaa
ggggaaagaggagaaaaaggaccacgtggtgacaagggagaacgtggcctagatggtttt
cctgggaaggctggcttggatggaaaacagggtgccaaaggaagtccaggtcaacctgga
cctgtaggactgcaaggagagaagggtgatatcggtccccctggtaaaccaggctcagca
gtacagatcgaaggcttgaaaggagagcaaggagctcctggcccacgggggcctatgggg
cctccaggaactccaggtaccccaggatcacccggatcagaaggcaagatgggacctcca
ggtctacaaggtctacggggcaagaaaggagaagtaggtctcgccggagttgatggatta
ccgggaccttctggtcccccaggacctcctggaattgttggttctcctggacttgatgga
tctccaggtcaaccaggagaaactggcagaaaaggtgaaagtgggccaccgggtttacct
ggaaaatctggtcaagatggtttacctggtcttccaggctcaaaaggagaacaaggggaa
aggggagaagttggtaaagcaggctccaagggtgaatcaggccccccaggaccgtctggc
atagtcggggaaaggggtgaagctggtctcccaggcccacctggtttgcctggtccaaga
ggagaaaagggaagccagggtgacaaaggaagagctgggctcactggcttcaaaggtgac
agaggagaaaagggtgaaattggtgctcctggcctcccaggtcaacctggaaaaactacc
ccatttacaccaaggcctagtattcctggagaacaagggccaaaaggtgaaaaaggtgat
cgtggagaaagaggtgaacccggagaacaaggtgttccaggagaacagggtccaatcgga
ccagctgggcaacagggtctgaaaggacaagaaggggaagtaggtcaacctggacctcca
ggagaaattggtccccctggacctgaaggaccatctggcccacgtggtttgcctgggaat
gtgggtataccaggagctgatggtcagccaggaattgatggagaaaaaggagaaaaggga
gaacctggtaaggaaggaaaatcaggtccacctggtcctacaggtgaaccaggagctgtt
ggagaacctggattacctggaaagggtcgagatggagaaaggggtgaaagaggtccacca
ggtttacctggatcctttgggcctaagggagatcgaggcgccccaggtgttccaggtcaa
ccaggagatagaggagccccaggtgttggactttcagggccactaggacctgtgggacct
cctggagacaaagggccaccgggtcctcgcggcctgccaggcatccaaggtccccctgga
cagactggtcatgatggcttaccaggaaatccaggagaaaggggaccaccaggaaaaaca
ggtcccactcctctccttaaccctgacgacatcagactattagttaaggatgtttgcact
gattgtcctcctggaccatccggtctccctggaatcccaggacagaagggtgataaaggc
cttcgaggcccacctgggaatgatggaccagttggaaaaaggggagaacctgggctcaga
ggtccccccgggcctccaggagcagaaggtcccaagggtcctaaaggaggtgatggggca
tctggtgaagctggactgaaaggtgaacagggtcatcctggaatacctggtttcacgggt
ccccctgggaatccaggcccagctggaccagagggctccccgggacctataggctctcca
ggacctccaggagaagtggggaaagaaggtcccccaggacctcagggacccccaggattg
cttggacttatgggtgtacctggaaaggatggcaaagatggcaagccaggatcacctggg
gaaccgggtaagcctggagaaccggggctaccaggccaagagggtgccagaggaccaccg
ggtttcaagggtccaataggagatgcaggaaatcctgggatgagaggagaaccaggtcaa
cctggaactccgggccgggaggggctttcgggaaaagatggagatccaggacctgcggga
ccagaaggcccccgaggaattcgaggactagcaggcaagactggacctccaggtgcacct
ggggaacctggtcctgcaggtaacccaggctccaagggaagcaaaggtgaaactggcagt
ccaggcgttcctggtttcattgggccacgaggtcttcctggagaaccaggtgaaaagggg
gtcccagggaaagagggcacctcagggagtccaggagaacacggacaaaaaggcgacagg
ggggatcctggaactaaaggtgaaaaagggccagcaggagtgaagggaccaccaggtgat
ccaggagttcctggccgcaaaggacacacaggattaatgggtccctcaggaccatcagga
gagtcaggacaagttgggcctcctggtcctccaggccaacctggatttcctgggcctaga
ggggatcctccatcaacagaaacactgcgaagactcatccaagaagagttaggaaaacaa
cttgatgctagactgccctacctcataagccagttacagccttcccagatcaaagcacct
caaggtagaccagggcctcctggatcacctggaaaggaaggccttccaggtagagttggc
cctcctggagaacctggcagacctgggcaaccaggttcagaaggtccattgggacctatg
ggaccaaaaggtgtcagaggagagaaaggagagaagggagatgctggcattggccagagg
ggtgaaactggtcccccaggagtagcaggtgtcccaggtgaacctggctacggtaaggat
ggcgttcctggagtccaaggcgctcaaggtgaagctggcactcctggccttatgggaccc
ccaggacctccaggggccaatggacaatgtgacccctcccagtgtgcttattatgcaagc
tttgctgctcggcccagcaacgtcaaaggtccttaa
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integrated database retrieval system
