Mixta gaviniae: C2E15_04640
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Entry
C2E15_04640 CDS
T05418
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
pgz
Mixta gaviniae
Brite
KEGG Orthology (KO) [BR:
pgz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgz03019
]
C2E15_04640
Enzymes [BR:
pgz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C2E15_04640
Messenger RNA biogenesis [BR:
pgz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C2E15_04640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUX92438
UniProt:
A0A2L0ICW1
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All DBs
Position
1008352..1010841
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AA seq
829 aa
AA seq
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MLQCAPSEDQCWTEFRLSDLPVSAVLPEVLAALKQAPQVLLAAPTGAGKSTWLPLRLLQQ
GGFAGRIIMLEPRRLAARNVAQRLAEQLGEEPGGQVGYRMRGESRSGPATRLEVVTEGIL
TRMLQQDPMLEGVSLVILDEFHERSLQADLALALLLDVQQGLRDDLRLLIMSATLDNARL
SARLPDAPLIASEGRSFPVERRYASLPPQLRFDEAVAREVAQLLRAESGSLLLFLPGVSE
IERVKNQLASRVDDDTELCPLYGALPLAAQRRAILPAPVGKRKVVLATNIAETSLTIDGI
RLVVDSALERAARFDVRSGVTRLQTQRVSQASMTQRAGRAGRLSPGICLHLIGREQAERA
AAQSEPEILQSDLSALWLDLLQWGCRDVAQLSWIDTPPAPALQAAQTLLRTLGAIDGEGR
LTAKGRAMAALGSEPRLAALLTAAQDNDALATAARLAAILEEPPRQGSRNLSDHLFTAHA
GWQQRARQLQKRLNGAGGSVDAALAPALLAQAFPDRIARRRGDSGRYQLAGGSGAMLDHD
DALTRHEWLIAPQLLQTDAQAEARMLLALPVDIAALQREVPALVRSETDVEWDEEKGTLR
AWQRDKIGVLALKSAPLAKPEAEVLHPAMLRWIREKGLATLNWTPQAVQLRLRLQCAAQW
LPEERWPAMDDDTLLDTLESWLLPEMNGVRDMRGLRQINLISALLHLLTWSQRQRLDSAL
PTHYTVPTGSRLPIRYDSEKPPALAVRLQEMFGEAQNPAIADGRVPLVLELLSPAQRPLQ
ITRDLAAFWQGAYPQVQKEMKGRYPKHAWPDDPASASPTRRTKKYAAPQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgctacaatgcgcaccatcagaagaccaatgctggacggagtttcgtttgagtgattta
ccggtaagcgccgtgctgcccgaggtgctggccgcgctgaagcaggcgcctcaggtgctg
ctggccgccccgacgggtgcgggcaaatcgacctggctgccgctgcggctgttgcagcag
ggcggcttcgccgggcgcatcattatgctggagccgcgtcgcctggcggcgcgcaatgtc
gcgcagcgtctggcggagcagttgggcgaggagccgggcggccaggtcggctaccgcatg
cgcggcgaaagccgcagtgggcccgcgacccgcctggaggtggtaaccgaaggcatcctg
acgcgcatgctgcagcaggacccgatgctggaaggggtatcgctggttattctcgatgag
tttcacgagcgcagcctgcaggccgatctggcgctggcgctgttgctggatgtgcagcag
ggcctgcgcgacgatctgcggttgctgatcatgtccgccacgctggataacgcgcgtctc
agcgcgcgcctgcccgacgcgccgcttatcgcctccgaagggcgcagctttccggtggag
cggcgctacgccagcctgccgccgcagctgcgctttgatgaggcggtggcgcgcgaggtg
gcgcagctgctgcgtgcggaaagcggctcgctgctgctgtttctgcccggcgtaagcgaa
atcgaacgcgtgaagaatcagctggcgtcgcgcgtggatgacgatactgaactctgtccg
ctctacggcgcgctgccgctggcggcgcagcgccgcgccattctgccggcgcctgtcggc
aagcgtaaggtggtgctggcgactaacatcgccgagaccagcttaaccatcgacggtatc
cggctggtggtggacagcgcgctggagcgcgcggcgcggtttgacgtgcgcagcggcgtt
acccggctgcaaactcagcgcgtcagccaggcgtcgatgacgcagcgtgccggccgcgcc
ggccgtctgtcgccgggcatctgcctgcacctgatcggtcgcgaacaggcggagcgcgcc
gccgctcagagcgaaccggaaattttacagagcgatctcagcgcgctgtggctcgatctg
ctgcagtggggctgccgcgacgtcgcgcagctgagctggatcgatacgccgccggcacct
gcgctgcaggcagcgcaaacgctactgcgtaccctgggcgccatcgacggcgaaggccgc
ctgaccgcaaaagggcgcgcgatggctgctttgggcagcgagccgcgtctggcggcgcta
ctgaccgctgctcaagataacgacgcgctggccaccgccgcgcgtcttgcggcgatcctc
gaagagccgccgcgccagggcagccgcaatctcagcgatcacctgtttaccgcgcacgcc
ggctggcagcagcgcgcgcgtcagctgcaaaagcggctgaacggcgcgggcggctcggtc
gacgccgcactggcaccggcgctgctggcgcaggcgtttcccgatcgtattgcacggcgg
cgcggcgacagcgggcgctatcagctggcgggcggctcgggagcgatgctcgatcacgac
gatgccctgacgcgtcatgaatggctgatcgcgccgcagctgctgcagaccgacgcgcag
gccgaggcgcgcatgctactggcgttgccagtcgatatcgcggcgctgcagcgcgaggtt
cccgccctggtgcgcagcgaaaccgacgttgaatgggacgaagagaagggcacgctgcgc
gcgtggcagcgcgataaaatcggcgtgctggcgctgaaatcggcgccgctggcgaagccg
gaggcggaggtgctgcacccggcgatgctgcgctggatccgcgaaaaggggctggcgacg
ctgaactggacaccgcaagccgtacagttacggctgcggctgcagtgcgcggcgcagtgg
ctgccggaagagcgctggccggcaatggacgacgacaccctgctggacacgctggaaagc
tggctgctgccggagatgaacggcgtgcgcgacatgcgtgggctgcgccagatcaacctc
atcagcgcattattacatttgctcacatggtcgcaacgtcagcggctggatagtgcgttg
ccaactcattacactgtgccgaccggcagccgcctgccgattcgctatgacagcgaaaag
ccgcccgcgctggcggtgcgcctgcaggagatgttcggcgaagcgcaaaatccggcgata
gccgacgggcgcgtgccgctggtgctggagctgttatcccccgcgcagcggccgctgcaa
atcacccgcgatctcgccgcgttctggcagggtgcttatccgcaggtgcagaaagagatg
aaagggcgctaccctaagcacgcctggcccgacgatccggccagcgcgtcgcccacgcgc
cgcaccaaaaaatatgccgcgccgcagtag
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