Panicum hallii (Hall's panicgrass): 112874829
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Entry
112874829 CDS
T07366
Name
(RefSeq) probable E3 ubiquitin-protein ligase BAH1-like 1 isoform X1
KO
K16275
E3 ubiquitin-protein ligase BAH [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112874829
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112874829
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112874829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPX
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
112874829
NCBI-ProteinID:
XP_025794166
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Position
9:9132185..9136935
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AA seq
414 aa
AA seq
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MLRQRQRRRPPDRRQPERFPFPSVGALSEHRASKRVARPERLRPAAAVSSPPRAGDPVFP
PCCRAPVAHADTMKFGATYEEYLRLEQDKYLGQCSRVEYKRLKKVLKKCRVGRSLQVDGA
NGDEKHQGSDEYSDVCECNSCTLCDEMFFTELNKEASEIAGCFRSRVQRLLHLHVPSGLQ
RYIWRFRQCFIDDQQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFRSKMQT
EHTELLQSPWLIELGAFHLNCDDSDTDELGAGGFFKNGFFKNFSCDLTGAQPLLTMTISE
TLKYEYSLTCSICLDTLFNPYALSCGHLFCKACACGAASVYIFQGVKSAPLDAKCPVCRA
VGVFGHAVHMTELELLLKRRDKDYWRQRLREERTAMVKQSKEYWDSQAILSMGI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgctccgccaacggcagcggaggcggccgccagaccgacgccaaccagagcgtttcccg
tttccttcagttggcgccctgagcgagcaccgagcaagcaagcgcgtcgcccgaccagag
cgcctccgccccgccgccgccgtttcttctcctccgcgcgccggcgatcctgttttcccg
ccctgctgccgcgcgccggtggcccatgcagacacgatgaagtttggtgcaacatatgaa
gagtacctccgcttggagcaggacaagtacctaggacaatgctcccgtgtagaatacaaa
cgcctcaagaaggtactgaagaaatgtcgagttggtcgctcgttgcaagtcgatggagca
aatggtgatgagaagcaccaggggagcgatgaatattcagacgtttgtgaatgcaactca
tgcacattgtgtgatgagatgttctttacagaactcaacaaggaggcatcggaaatagca
ggctgtttcagatctagagtacaacgtctcctccaccttcatgttccttcaggattacaa
cgctatatatggcgttttagacagtgtttcatagatgatcaacaaataatggttcaagaa
ggcagaatgcttctcaactatgtgaccatgaatgctattgctattcgcaaaattctcaag
aaatatgacaagatacatggttctgtaagtggcagagatttcaggagcaagatgcaaact
gagcataccgaactgctgcaatcaccttggctgatagagcttggtgctttccatctcaac
tgtgacgactcagatactgatgaacttggagctggagggttcttcaagaatggattcttc
aagaatttttcctgcgacctgaccggagcacagccattgctaacaatgaccatatctgaa
actctgaagtacgagtacagcctaacttgttcaatctgcttggacactttgttcaaccct
tatgcacttagctgtgggcatctattctgcaaagcctgtgcatgtggtgctgcttctgtc
tacattttccagggtgtcaagtctgcacctctggatgccaagtgccctgtatgccgagcg
gttggtgtgtttggccatgccgtgcatatgactgaactggaattacttctcaaaagaagg
gacaaagattactggaggcagagactgcgcgaagagcgaactgcgatggtgaagcaatcc
aaagaatactgggactcgcaggcgatactatcaatggggatctga
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