Panicum hallii (Hall's panicgrass): 112876345
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Entry
112876345 CDS
T07366
Name
(RefSeq) ribosome biogenesis protein bms1
KO
K14569
ribosome biogenesis protein BMS1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112876345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112876345
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
90S particles
GTPase
112876345
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
AAA_16
AAA
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-GeneID:
112876345
NCBI-ProteinID:
XP_025796218
LinkDB
All DBs
Position
9:complement(62879055..62888475)
Genome browser
AA seq
1189 aa
AA seq
DB search
MAPADGGGEQPHKAHRQHKSGAKARKKKGKGKGAAGDDGGGEQKNPKAFAFQSATKAKRL
QARSAEIEQRRLHVPIMDRSIGEPPPFVVVVQGPPQVGKSLLIKCLVKHYTKQNLSEVRG
PITVVSGKSRRVQFLECPNDINGMIDAAKIADLALLLIDGSYGFEMDTFEFLNIMQVHGF
PKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWAEIKEGAKLFYLSGLIHGKYTKREVHNLA
RFISVIKPVPLSWRMAHPYLLVDRFEDVTPPENVRLNKKCDRKITLYGYLRGCNMKRGTK
VHITGAGDFSLSGVTGLADPCPLPSAAKKRGLRDKEKLFYAPMSGLGDLLYDKDAVYINI
NDHLVQFSKNDDNEAPKKQGKGKDVGVALVQRLQNTRYSLDEKLEKSFINFFGRGAAAQS
KDSDADGNVISASQDDQGDANVFEQVDGINTTNADTMDSDGHSGCSSDSEGDNDDDIQQR
DRDVELREEVEFCNGRLRRKAVSSKFQDDIDDDVTDEDDSANEDSGDDELSGGSTSSDDS
GEAGASDDETENTSKWKESLLATLSRRSASLMQRVYEPSVKLDSVVSKENDDTEANSSDD
EFFVPKGQKKQADNELPTYDDIDAEDCSKFFKAKLRDWSNEDLINSIRDRFVTGNWSKAA
LRGQELNDNGEDDEEIYGDFEDLETGEVHKSQASENAEGNGGAHKEDDLEVEERRRKKLA
LRSKFDAQYDGSELSGDEADDDKKKSRREQSNGGSYFDKLKEEMEMRKQMNISELNDLDE
DTRVEIEGFRTGTYIRLEVHGVPFELVEHFDPCHPILVGGIGLGEENTGYMQASLKRHRW
HRKVLKTKDPIIVSIGWRRFQTTPVYAIEDQNGRHRMLKYTPEHMHCFAMFWGPLAPPKS
GVLAVQNLSNNQVPFRITATGWVQEFNNTARIVKKIKLTGTPCKIFKKTALIKGMFTSDL
EVARFEGAAIRTVSGIRGQVKKAAKIEPGDALKRKGENTEGIARCTFEDRILMSDIVFLR
AWVNVEIPTYCNLVTTALQPRKETWQGMRTTAELRRAHNIPIPHNKDSAYKPIERKPRKF
NPVEIPAKLQQLLPFKSKPKDRPKQKQPTVENRVPVIMERSEKRTYEAIQQLMLLKHEKA
RKKKIKEQQKKKAYEAEKAKTEQLTKKRQREERRERYREEDKQKKRARR
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggctccggcggacggaggcggggagcagccgcataaggcgcaccgccagcacaagtcc
ggcgccaaggcgcggaagaagaagggcaagggcaagggcgcagccggcgatgacggtggg
ggcgagcagaagaaccccaaggcttttgcatttcagtcagcaacgaaggccaagcgtcta
caggctcggtcagcagagattgaacaacggcgacttcatgttcctataatggaccgttca
atcggtgaacctcctccttttgttgtagtagttcaaggacctccgcaggttgggaagtct
ctgttgataaaatgtctggtaaagcactacaccaaacaaaacctgtcagaagtccgtggt
cccatcactgttgtatcaggtaaaagcaggagggtacagttcttggagtgtccaaatgat
ataaacggaatgattgatgctgctaaaatagctgatcttgctttattgctcattgatgga
agctatggttttgaaatggacacatttgagtttcttaatatcatgcaagtgcatggattc
cccaaggtgatgggagtactcacacatcttgataagtttaaagatgtgaagaaactcagg
aaaactaagcagcgccttaaacatcgattctgggctgagataaaggagggagcaaaacta
ttctacttgtctggtctcattcatggaaaatacaccaaaagagaagtccataatcttgca
agattcatctccgtaatcaagcctgttccattgagttggcggatggcacatccttatttg
ttagttgatagatttgaagatgtcacccctccagaaaatgtgcgccttaacaaaaagtgt
gacagaaaaataacattatatggttaccttcgtggctgtaatatgaaaagggggaccaag
gtgcatatcacaggtgcaggtgatttcagcttgtctggggtgacgggtttggctgatcct
tgccctttgccatcagctgcaaagaaaagaggattgcgtgacaaggaaaagctgttctat
gcaccaatgtctggtcttggggatctactttatgacaaggatgcggtatacatcaatatc
aatgatcatcttgttcagttttcaaagaatgatgacaatgaagcacctaaaaagcaaggg
aaaggtaaagatgttggtgtggcccttgtacaaagacttcaaaatacaagatactccctc
gatgaaaaactggaaaaaagttttataaatttctttggtagaggggctgctgctcaatcc
aaagacagtgatgcggacggcaatgtcatctctgcaagccaggatgatcagggagatgca
aatgttttcgagcaagtagacggtattaacactaccaatgctgacaccatggacagcgat
gggcattctggatgctctagtgatagtgaaggggacaatgatgatgatattcagcaaagg
gatcgtgatgttgaattaagggaggaagtagaattttgtaatggaagattgaggcgaaaa
gctgtatcctctaaatttcaagatgatattgatgacgatgtaactgatgaagatgacagt
gccaatgaggattctggtgatgacgagttatctggaggttctacatcatcagatgacagt
ggagaagctggtgcttcagatgacgaaactgaaaacacttcaaaatggaaagagtccttg
cttgcaacactgtcccgacggagtgccagtctgatgcaacgtgtgtatgagccttcggta
aagctagacagtgtggtgtcaaaagaaaacgatgatactgaagccaatagctcagatgat
gaatttttcgtaccaaaaggacaaaagaagcaagcagataatgaattgccaacctatgat
gatattgatgctgaggattgctccaagtttttcaaagctaagctaagagattggtctaat
gaagatctcatcaatagcatccgtgatcgttttgtgacgggaaattggtcaaaagctgct
ttacgaggacaggagttaaatgacaatggagaagatgatgaagaaatctatggtgatttt
gaagatcttgaaactggcgaggtacataagagccaggcatctgaaaatgctgaagggaat
ggtggtgctcacaaagaagatgacctagaagttgaagaaagaagacgtaagaagctggca
cttagatcaaaatttgatgcgcaatatgatggatctgagctctctggtgacgaagctgat
gatgacaagaagaaatccagaagagaacagtctaatggagggagctattttgacaaatta
aaggaggaaatggaaatgcgcaagcaaatgaatatatctgagctcaacgatctggatgag
gatacccgagtagaaattgagggattcaggactggcacttatatcagattagaagtacat
ggtgtgccatttgagcttgttgagcattttgatccttgccaccccattcttgttgggggt
attggccttggtgaggagaacacgggctacatgcaggcaagtttgaagcgccataggtgg
cacaggaaagtactgaagacaaaggacccaatcattgtctcaattggttggaggcgattt
caaacaactcctgtctatgcaatagaggatcagaatggtcgacatcgcatgctgaagtat
acgcctgagcatatgcattgttttgctatgttctgggggccacttgctccaccaaagagt
ggtgtattagcagtccagaatctttccaacaatcaggtgccatttaggataactgcaaca
ggctgggttcaagaattcaacaatactgccagaattgtgaagaagatcaaactcacaggc
acaccatgcaagatatttaaaaagactgctctgatcaaagggatgttcacatctgattta
gaggttgctaggtttgaaggtgcagccattcggacagtaagtggaatcagaggacaagtt
aaaaaggcagcaaagattgaaccaggagatgcgctaaagagaaaaggggaaaatacagaa
ggaattgcaagatgcacatttgaggacagaattcttatgagtgacattgttttcctgcgt
gcctgggtcaatgttgaaattcccacttactgtaaccttgtgaccactgctcttcaaccc
cgaaaggagacctggcaaggcatgagaacaactgctgagttgcggagggcgcacaatata
cctattccacacaacaaggactcggcttacaagcctattgagcggaaaccgcggaagttc
aatcctgtagagatccctgcaaaactgcagcagttacttccttttaaatctaagccaaag
gatagacctaagcagaagcaaccaacagttgaaaacagggtgccagtaattatggaacgc
agtgagaagagaacgtatgaagcaattcaacagctaatgctgctcaaacatgagaaggca
aggaagaagaaaatcaaggaacagcagaagaagaaggcatatgaggcagagaaagccaag
actgaacaactaacaaagaaacggcagcgggaagagaggcgtgagagatatcgggaagaa
gataagcaaaagaaacgtgcgcgcagatga
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