Panicum hallii (Hall's panicgrass): 112884556
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Entry
112884556 CDS
T07366
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
phai04141
Protein processing in endoplasmic reticulum
phai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112884556
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112884556
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112884556
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112884556
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112884556
03009 Ribosome biogenesis [BR:
phai03009
]
112884556
03110 Chaperones and folding catalysts [BR:
phai03110
]
112884556
04131 Membrane trafficking [BR:
phai04131
]
112884556
03051 Proteasome [BR:
phai03051
]
112884556
03029 Mitochondrial biogenesis [BR:
phai03029
]
112884556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112884556
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
112884556
Spliceosome [BR:
phai03041
]
Complex B
Other components
Prp19 complex
112884556
Complex C
Prp19-CDC5 complex
112884556
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
112884556
Chaperones and folding catalysts [BR:
phai03110
]
Heat shock proteins
HSP70 / DNAK
112884556
Membrane trafficking [BR:
phai04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112884556
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
112884556
Proteasome [BR:
phai03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
112884556
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
112884556
Exosome [BR:
phai04147
]
Exosomal proteins
Proteins found in most exosomes
112884556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
112884556
NCBI-ProteinID:
XP_025805749
LinkDB
All DBs
Position
3:16316746..16319720
Genome browser
AA seq
650 aa
AA seq
DB search
MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVAGPGDKPMIVVNYKGEEKQFSAE
EISSMVLTKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPT
AAAIAYGLDKKATSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN
RMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYT
TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN
GKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIP
RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIT
VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKK
VDAKNALENYAYNMRNTIKDDKIASKLGADDKKRIEEAIDGAISWLDSNQLAEADEFEDK
MKELEGICNPIIAKMYQGAGADMGGAAGMDEDMPAGGGGSGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggggaggggccggcgatcgggatcgacctgggcacgacctactcgtgcgtc
ggcgtatggcagcacgaccgtgtcgagatcatcgccaacgaccaggggaaccgcaccacg
ccgtcctacgtcgccttcaccgacaccgagcggctcatcggcgacgccgccaagaaccag
gtcgccatgaacccgaccaacaccgtctttgacgcgaagcggttgatcggccggaggttc
tctgacccgtccgtgcagagtgacatgaagctatggccgttcaaggtcgtggctggccct
ggcgacaagccgatgatcgtggtcaactacaagggcgaggagaagcagttctctgctgag
gagatctcctccatggtgctgaccaagatgaaggagatcgctgaggcctacctcggctcc
accatcaagaacgccgtggtcaccgtccctgcctacttcaacgactcccagaggcaggcc
accaaggacgccggcgtcatctccggcctcaacgtgatgcgcatcatcaacgagcccacc
gccgcggccatcgcctacgggctcgacaagaaggccaccagcaccggcgagaagaacgtg
ctcatcttcgacctcggcggtggcaccttcgatgtgtcgctgctgaccatcgaggagggc
atcttcgaggtgaaggccaccgccggcgacacccatctgggtggggaggacttcgacaac
cgcatggtgaaccacttcgtccaggagttcaagcgcaagcacaagaaggacatcagcggc
aacccgcgcgcgctgcggcgcctgcggacggcctgcgagcgcgcgaagcgcacgctgtcg
tccaccgcgcagaccaccatcgagatcgactcgctgtacgagggcatcgacttctacacc
accatcacccgcgcccggttcgaggagctgaacatggacctcttccgcaagtgcatggag
cccgtggagaagtgcctccgcgacgcaaagatggacaagagcaccgtgcacgacgtcgtg
ctcgtcggcggctccacccgcatccccaaggtgcagcagctgctccaggacttcttcaac
ggcaaggagctgtgcaagagcatcaaccccgacgaggccgtggcgtacggcgccgccgtc
caggccgccatcctgagcggcgagggcaatgagaaggtgcaggacctgctcctgctagac
gtcacgccgctgtccctcggtctagagaccgccggtggcgtcatgaccgtgctgatcccg
cggaacaccaccatccccaccaagaaggagcaggtcttctccacctactccgacaaccag
ccgggcgtgctgatccaggtgtacgagggcgagcgcgccaggaccaaggacaacaacctc
ctgggcaagtttgagctgtccggcatcccgccggcgcctcgcggcgtgccccagatcacc
gtgtgcttcgacatcgacgccaacggcatcctgaacgtgtcggcggaggacaagacgacg
gggcagaagaacaagatcaccatcaccaacgacaaggggcggctgagcaaggaggagatc
gagaagatggtgcaggaggcggagaagtacaaggcggaggacgaggagcacaagaagaag
gtggacgccaagaacgcgctggagaactacgcctacaacatgcgcaacaccatcaaggac
gacaagatcgcctccaagctgggcgcggacgacaagaagcgcatcgaggaggccatcgac
ggcgccatcagctggctggacagcaaccagctcgcggaggcggacgagttcgaggacaag
atgaaggagctggagggcatctgcaaccccatcatcgccaagatgtaccagggcgccggc
gcagacatgggcggagcagcgggcatggacgaggacatgccggccggcggcggcggcagc
ggcgctggccccaagatcgaggaggtggactaa
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