Panicum hallii (Hall's panicgrass): 112887406
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Entry
112887406 CDS
T07366
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112887406
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
112887406
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Cytochrom_D1
WDR54
PROPPIN
WD40_2
F420H2_quin_red
NusG_II
Motif
Other DBs
NCBI-GeneID:
112887406
NCBI-ProteinID:
XP_025809354
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All DBs
Position
3:7355938..7362113
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AA seq
472 aa
AA seq
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MRGVQRGARGEASRKADRELDRFAMANEVFHITRARSEPCHRTRGAASARRRRPFSTFGL
VSARESGRTGGAGFSPADRAYVGSRHIPTKGPWGVDEVDSEAYVSQFSADGSLLVAGFRG
SRIRVYNADRGWRIHKDISCRSLQWTVSDIALSPDQQFLAYASLSPIVHIVNVQSSGKES
HANVNEIHEGLAFTGDEHDDEDFGIFSVKFSKDGKEVVIGNNERSIYVYDLAANKVSVRI
RAHTADVNAVTFADESGNVLYSGSDDSLCKVWDRRCLAGEKSAGILTGHLDGVTFIDSRG
DGRYFISNCKDQRIKLWDIRKMSSVVRVRPVRIVDWDYRWMPFPSEAHHFKHPNDQSLAT
YRGHSVLQTLIRCYFSPMHSTGQRYIYTGSSDKSVHIYDVVSGKTVERLSWHSSVIRDCT
WHPCYPTLITSSWDGYVARWEASGDDDDPSMLVADEQRASPYFQPYGDPFMM
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggagtacagcggggtgctcgcggggaggcgtcccggaaggcggaccgcgagttg
gaccggttcgccatggccaacgaggtgttccacatcactagggccaggtcggagccctgt
caccggactcgcggtgcggcttccgcccgccggaggaggcccttctcgactttcgggctc
gtgtcggcgagggagtctggccgcacgggcggcgccgggttctcgccggccgatcgcgcc
tatgttggcagcaggcacatccccacgaaagggccgtggggcgtcgacgaagtggatagc
gaggcctacgtctcgcagttctctgctgatgggtcgttgctcgtcgctgggtttcgggga
agccgcatcagagtttacaatgccgatagagggtggaggattcataaggatataagctgc
agaagtctgcagtggacagtttcagatattgctctttcacctgatcaacaattccttgcc
tatgcaagtttgtcgcctattgttcacattgtgaatgtgcagagttctggaaaggaatca
catgctaatgttaatgaaattcatgagggattggctttcaccggcgatgaacatgatgat
gaagactttggaatattttctgttaaattctcaaaagatggtaaagaagttgttattggg
aacaatgaaagatcaatatatgtttatgaccttgcagcaaataaagtgtcagttcgcatc
cgtgctcatactgctgatgtcaatgctgttaccttcgctgatgaaagcggcaatgtgctg
tactctggaagtgatgatagtctctgtaaggtgtgggacaggcgttgccttgctggggaa
aaatcagcaggtattttgacaggtcacttagatggagttacatttattgatagccgtggt
gatgggcggtatttcatctccaattgcaaggatcagagaataaaactttgggacatcagg
aaaatgtcttctgtcgtgagagttcgcccggtgagaatagtggactgggactataggtgg
atgccattcccatcagaagcacatcattttaagcatccaaacgatcagtctttggccaca
tacagaggtcattcagttctgcaaacacttatccgttgctacttctcccctatgcacagc
acgggccagaggtacatatacacaggatccagtgacaagtctgtacatatttatgatgtg
gtaagcgggaagaccgttgagaggctttcatggcatagctcagtcatcagagactgcacc
tggcatccgtgctacccaaccctcatcacctcctcctgggacggttatgttgcccggtgg
gaggcctcaggcgatgacgatgacccttcaatgcttgtcgccgatgagcagagggcaagc
ccttactttcagccatacggcgatcccttcatgatgtag
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