Phyllostomus hastatus (greater spear-nosed bat): 123817007
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Entry
123817007 CDS
T07912
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas04151
PI3K-Akt signaling pathway
phas04510
Focal adhesion
phas04512
ECM-receptor interaction
phas04611
Platelet activation
phas04820
Cytoskeleton in muscle cells
phas04926
Relaxin signaling pathway
phas04933
AGE-RAGE signaling pathway in diabetic complications
phas04974
Protein digestion and absorption
phas05146
Amoebiasis
phas05165
Human papillomavirus infection
phas05205
Proteoglycans in cancer
phas05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123817007 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123817007 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123817007 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123817007 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
123817007 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
123817007 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
123817007 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
123817007 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123817007 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
123817007 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
123817007 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123817007 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phas00536
]
123817007 (COL1A1)
Glycosaminoglycan binding proteins [BR:
phas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123817007 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
123817007
NCBI-ProteinID:
XP_045692310
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MFSFVELRLLLLLAAAALQTHGQEDGQEDIPPVTCVQNGIRYHDREVWKPEVCQICVCDN
GNVLCDDVICEDTRNCPGAVAPPGECCPVCPDGEVSPTDLETTGVEGPKGDTGPRGPKGP
AGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGVSVPGPMGPSGP
RGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGP
PGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGL
PGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEGP
QGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGP
PGPKGNSGEPGAPGNKGDAGAKGEPGAPGIQGPPGPAGEEGKRGARGEPGPAGLPGPPGE
RGGPGGRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS
PGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGA
VGAAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGESGKPGEQGVPGD
LGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGGQGAPGL
QGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGPRGLTGPIGPPGPAGAPGDKGESGP
SGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGP
AGPPGPIGNVGAPGPKGARGAAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGG
KGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQ
RGERGFPGLPGPSGEPGKQGPSGPSGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGR
DGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPSGPAGPIGPAGARGP
TGPQGPRGDKGEAGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGS
PGAPGKDGLNGLAGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQ
EKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCH
SDWKNGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVDRKNWYISKNPKEKKHIWF
GESMTGGSQFEYGGPDSDPADVAIQLTFLRLMSTEASQNLTYHCKNSVAYMDQQTGNLKK
SLLLQGSNEIELRSEGNSRFTYTVTHDGCSSHTGAWGKTVIEYKTTKTSRLPIIDVAPLD
IGAPDQEFGMDIGPVCFL
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggaactccggctcctgctcctcttagcggccgccgccctccagacg
cacggccaagaggacggccaagaagacatcccaccagtcacctgcgtacagaacggcatc
aggtaccatgaccgagaagtatggaaacccgaggtctgtcagatctgtgtctgcgacaat
ggcaacgtgttgtgtgatgacgtgatctgcgaggacaccaggaactgccccggcgccgtt
gcccccccgggcgagtgctgcccggtctgccccgacggcgaggtgtcgcctacggacctg
gaaaccacaggagtcgagggacccaaaggagacaccggcccccgaggcccgaagggaccc
gcaggcccccctggccgagatggcatccccgggcagcctggacttcccggcccccccggc
ccccccggacctcccggaccccctggcctcggaggaaacttcgctccccagatgtcttat
ggttatgacgagaaatccgccggagtttccgtgcctgggcccatgggtccttctggtccc
cgtggtctccctggcccccctggtgcacctggcccccaaggtttccagggccctcccggt
gagcctggcgagcccggagcttcgggtcccatgggtccccgtggtcccgctggcccccct
ggcaagaacggagatgatggtgaagctggaaagcccggtcgccccggcgagcgtgggcct
cccggacctcagggtgctcggggattgcctggaacagctggtctgcctggaatgaaggga
cacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggtcccaag
ggagagcctggtagccctggtgaaaatggagctcctggtcagatgggcccccgaggtctg
cctggtgaaagaggtcgccctggagcccctggccctgctggtgctcgtggaaatgacggt
gctactggtgctgctggcccccctggtcccactggtcccgctggtcctcctggcttcccc
ggtgctgttggtgctaagggtgaagctggtccccaaggagcccgaggctctgaaggtccc
cagggcgtgcgtggtgagcccggcccccctggccctgctggtgctgctggccctgctgga
aaccctggtgctgatggacagcctggtgctaaaggtgccaatggcgctcctggtattgct
ggtgctcccggtttccccggtgcccgaggcccctctggaccccagggccccggcggtccc
cctggtcccaaaggtaacagtggcgaacctggtgctcctggcaacaaaggagatgctggt
gccaagggagagcccggtgcccctggtattcaaggaccccctggccctgctggggaggaa
ggaaagcgaggagctcgaggtgaacctggacctgctggcctgcccggaccccctggcgag
cgtggtggacctggtggccgtggtttccctggcgcagatggtgtggccggtcccaagggt
cccgccggtgaacgtggttctcctggccctgctggccccaaaggctctcctggtgaagct
ggccgccccggtgaagctggtctgcctggtgccaagggtctgactggaagccctggcagc
cctggtcctgatggcaaaaccggcccccctggtcccgctggtcaagatggtcgccccgga
cccccaggcccccctggtgcccgtgggcaggctggtgtgatgggatttcccggacctaaa
ggcgctgctggagagcccggtaaagctggagagagaggtgttcctggaccccccggcgcc
gtgggtgctgctggcaaagatggagaagctggagctcagggaccccctggccctgctggc
cctgctggtgagagaggcgaacaaggccctgccggctcccccggattccagggtctccct
ggccctgctggtcctcctggtgaatcaggcaaacccggtgaacagggtgttcctggagac
cttggtgcccctggcccctctggagcaagaggcgagagaggtttccctggtgagcgtggt
gtgcaaggtccccccggccctgctggtccccgtggagccaacggtgcccctggcaatgat
ggtgctaagggtgatgctggtgcccccggagcccccggtggccagggtgcccctggcctt
cagggaatgcctggcgaacgcggcgcagctggtcttccaggacctaagggcgacagaggc
gatgctggtcccaaaggtgctgatggtgctcctggcaaagacggtccccgaggtctgact
ggccccattggtcctcctggccctgctggtgcccctggtgacaagggtgaaagtggtcct
agcggccctgctggtcccaccggagctcgtggtgcccccggagaccgtggtgagcctggt
ccccccggccctgctggcttcgctggcccccctggtgctgatggccagcccggtgctaaa
ggtgaacctggtgatgctggtgctaaaggcgatgctggtcctcctggccctgctggacct
gctggcccccctggtcccattggtaacgttggtgctcctggacccaaaggtgctcgtggc
gctgccggtccccctggtgctactggtttccctggtgctgctggccgagttggtcccccc
ggcccctctggaaatgctggaccccctggccctcctggccctgctggcaaagaaggtggc
aaaggcccccgtggtgagactggccccgctggacgtcccggtgaagttggtccccccggt
ccccccggccccgctggcgagaaaggagcccctggtgctgacggacccgctggtgctccc
gggacccctggacctcagggcatcgctggacaacgtggtgtggtcggcctgcctggtcag
cgaggagaaagaggcttccctggtcttcccggcccctctggtgaacctggcaagcaaggt
ccctctggaccaagtggcgaacgtggcccccctggtcccatgggcccccctggattggct
ggaccccctggcgagtctggacgtgagggagctcctggtgctgaaggctcccccggacga
gatggtgctcctggtgccaaaggtgaccgtggtgagactggccccgctggaccccctggc
gctcctggagctcccggtgcccctggccccgtcggccctgctggcaagagtggtgaccgt
ggtgagactggtccttctggtcctgctggtcccattggccccgctggcgcccgcggcccc
actggaccccaaggcccccgtggtgacaagggtgaggcaggcgaacagggcgacagaggc
atcaagggtcaccgtggtttctccggtctccagggtccccctggccctcctggctctcct
ggtgaacaaggtccctccggagcttctggtcccgctggtccccgtggtccccccggctct
cctggtgctcctggcaaagacggactcaacggccttgccggccccatcggcccccctggt
ccccgtggccgcactggcgatgctggtcccgttggtccccccggccctcccggacctccc
ggccctcccggtcctcccagcggcggtttcgacttcagcttcctgccccagccacctcag
gagaaggctcacgacggcggccgctactaccgggccgatgatgccaacgtggtccgagac
cgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaacatccgg
agccccgaaggcagccgcaagaacccagcccgcacctgccgagacctcaagatgtgccac
tctgactggaagaacggagaatactggatcgaccccaaccaaggctgcaacctggacgcc
atcaaggtcttctgcaacatggagacaggtgagacctgcgtgtaccccactcagcccagc
gtggaccggaagaactggtacatcagcaagaaccccaaggagaagaaacacatctggttc
ggcgagagcatgaccggcggatcccagttcgagtacggcggcccggactccgaccccgcc
gacgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaacctc
acctaccactgcaagaacagcgtggcctacatggaccagcagacaggcaacctcaagaag
tccctgctcctccagggctccaacgagatcgagctccggtccgagggcaacagccgcttc
acctacactgtcacccacgacggctgctcgagtcacaccggagcctggggcaagacagtg
atcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgtggcccccttggac
attggcgccccagaccaggaattcggcatggacatcggccctgtctgcttcctgtag
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