Planococcus halocryophilus: BBI08_04475
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Entry
BBI08_04475 CDS
T04473
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
phc
Planococcus halocryophilus
Brite
KEGG Orthology (KO) [BR:
phc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phc03021
]
BBI08_04475
Transcription machinery [BR:
phc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI08_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
Terminase_5
HTH_23
YkyA
Motif
Other DBs
NCBI-ProteinID:
ANU13141
UniProt:
A0A1C7DPD7
LinkDB
All DBs
Position
complement(1751420..1751986)
Genome browser
AA seq
188 aa
AA seq
DB search
MEKSTDTSLYLRVSEQDKDALEQLYDRYEKILFSFLYKMLEDRGLAEEALQEVFIKIWRG
KGVYDESKGKFSSWLFRMAQNTAIDLIRKRKKPTVPIEEASQMVSNDEPVEQQVVWQEKK
TQIEMAVQHLSAEQQKMIDLFYFKGHTHETIADMCDIPLGTVKSRIRLALKKLKTSLHGM
QERGAYDD
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagtaccgatacaagcttgtatttgcgcgtaagtgaacaagataaagatgca
cttgaacaattgtacgaccgctatgaaaaaatccttttctcttttctttataaaatgctc
gaagaccgaggattggctgaagaagcattacaggaagtatttataaagatttggcgtggt
aaaggggtatacgatgaaagtaaagggaaattctcttcttggcttttcagaatggcgcaa
aatacggccattgatttgataagaaaaagaaaaaaacctactgttccaattgaagaggca
agtcaaatggttagcaacgatgaaccagttgaacaacaagtagtgtggcaagaaaagaaa
actcagattgaaatggctgttcagcatttatcggcagaacaacaaaaaatgattgatttg
ttctattttaaaggacatacacatgaaacaattgcagatatgtgtgatattccactggga
actgttaagagtcgaatacgactagctttaaaaaaattaaaaacatcactgcatgggatg
caggaaaggggggcttatgatgactaa
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