Pedobacter heparinus: Phep_0789
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Entry
Phep_0789 CDS
T00978
Name
(GenBank) hypothetical protein
KO
K19053
chondroitin B lyase [EC:
4.2.2.19
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Phep_0789
Enzymes [BR:
phe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.19 chondroitin B lyase
Phep_0789
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
ACU03011
UniProt:
Q46079
Structure
PDB
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All DBs
Position
935300..936820
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AA seq
506 aa
AA seq
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MKMLNKLAGYLLPIMVLLNVAPCLGQVVASNETLYQVVKEVKPGGLVQIADGTYKDVQLI
VSNSGKSGLPITIKALNPGKVFFTGDAKVELRGEHLILEGIWFKDGNRAIQAWKSHGPGL
VAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLN
NTARAIKDGSVGGPAMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQ
DSEAEIITSKSQENVYYGNTYLNCQGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGS
RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPL
DERRKEYCAANRLKFETPHQLMLKGNLFFKDKPYVYPFFKDDYFIAGKNSWTGNVALGVE
KGIPVNISANRSAYKPVKIKDIQPIEGIALDLNALISKGITGKPLSWDEVRPYWLKEMPG
TYALTARLSADRAAKFKAVIKRNKEH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgaataaactagccggatacttattgccgatcatggtgctgctgaatgtg
gcaccatgcttaggtcaggttgttgcttcaaatgaaactttataccaggttgtaaaggag
gtaaaacccggtggtctggtacagattgccgatgggacttataaagatgttcagctgatt
gtcagcaattcaggaaaatctggtttgcccatcactattaaagccctgaacccgggtaag
gttttttttaccggagatgctaaagtagagctgaggggcgagcacctgatactggaaggc
atctggtttaaagacgggaacagagctattcaggcatggaaatcacatggacccggattg
gtggctatatatggtagctataaccgcattaccgcatgtgtatttgattgttttgatgaa
gccaattctgcttacattactacttcgcttaccgaagacggaaaggtacctcaacattgc
cgcatagaccattgcagttttaccgataagatcacttttgaccaggtaattaacctgaac
aatacagccagagctattaaagacggttcggtgggaggaccggcgatgtaccatcgtgtt
gatcactgttttttttccaatccgcaaaaaccgggtaatgccggagggggaatcaggatt
ggctattaccgtaatgatataggccgttgtctggtagactctaacctgtttatgcgtcag
gattcggaagcagagatcatcaccagcaaatcgcaggaaaatgtttattatggtaatact
tacctgaattgccagggcaccatgaactttcgtcacggtgatcatcaggtggccattaac
aatttttatataggcaatgaccagcgatttggatacgggggaatgtttgtttggggaagc
aggcatgtcatagcctgtaattattttgagctgtccgaaaccataaagtcgagggggaac
gccgcattgtatttaaaccccggtgctatggcttcggagcatgctcttgctttcgatatg
ttgatagccaacaacgctttcatcaatgtaaatgggtatgccatccattttaatccattg
gatgagcgcagaaaagaatattgtgcagccaataggcttaagttcgaaaccccgcaccag
ctaatgttaaaaggcaatcttttctttaaggataaaccttatgtttacccattttttaaa
gatgattattttatagcagggaaaaatagctggactggtaatgtagccttaggtgtggaa
aagggaatccctgttaacatttcggccaataggtctgcctataagccggtaaaaattaaa
gatatccagcccatagaaggaatcgctcttgatctcaatgcgctgatcagcaaaggcatt
acaggaaagccccttagctgggatgaagtaaggccctactggttaaaagaaatgcccggg
acgtatgctttaacggccaggctttctgcagatagggctgcaaagtttaaagccgtaatt
aaaagaaataaagagcactga
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