Pedobacter heparinus: Phep_3028
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Entry
Phep_3028 CDS
T00978
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
phe
Pedobacter heparinus
Pathway
phe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Phep_3028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phe03400
]
Phep_3028
DNA repair and recombination proteins [BR:
phe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Phep_3028
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Phep_3028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ACU05226
UniProt:
C6Y2L6
LinkDB
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Position
complement(3620029..3620646)
Genome browser
AA seq
205 aa
AA seq
DB search
MNFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVDHFGNVLIRLRKEIKHCSV
CHNISDQHTCNICTAGKREKELICVVEDTRDVMAVENTGQYFGVYHVLGGLISPMDGIGP
SDLFIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGE
LEYADEITLGRSIVTRVPYQNSLIK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcttctaaactgcttgaagatgctgtcaatgaattttccaagctacccgga
gttggacaaaaaactgctttgagattggtgttgcacttgctgaataaagaacaggaagaa
gtggaccattttggaaatgtgcttatcaggcttagaaaagaaataaaacactgtagtgta
tgtcataacatttctgatcagcatacctgcaatatctgcacagccggaaaaagagaaaaa
gagttgatatgtgtggtagaggataccagggatgtaatggcagtcgaaaatacaggtcag
tattttggtgtttatcatgtgcttggcggtttgatttctccaatggatggcataggccct
tcagatctttttattgattcattggtgcagcgcgtggcaacaactcctgtaaaagaggtt
atcctggctttaagtgccactatggagggagataccacacttttttatttatataagcgg
cttaaagatttccagatcccaattacaaccatcgccaggggaattgcctttggcggagaa
ttggaatacgccgatgaaatcaccctgggcaggtctatcgtaacccgtgtgccttaccaa
aactcattaattaaataa
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