Pedobacter heparinus: Phep_4179
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Entry
Phep_4179 CDS
T00978
Name
(GenBank) ATP-dependent nuclease subunit B
Organism
phe
Pedobacter heparinus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ABC_C
Motif
Other DBs
NCBI-ProteinID:
ACU06370
UniProt:
C6XX64
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All DBs
Position
complement(5054508..5057363)
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AA seq
951 aa
AA seq
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MKPFLQEVAADLVARFGDGLQHCAIIFNNKRPAAYLQKHLADLIKKPFFSPSFFTVQEFF
AKWTNYRIADFYIQFFTLHKIYNQLLKEEGMESISGNKFFPLAKIILADFAQIDIDLVDA
DKIYRDLEDISVINKDFDYLSPEQYQYLSQFWTSYSEGKHKRQQELFIKMWRRMPKLYHQ
FHTALKEQGFVTNGAVYRGLAEGNAGEQNFIKGFDKGKIIFAGFNALSNAEAKVFVNLQK
AGKALFYFDADSYYLDDPLQEAGLFLRKNIYQLGIKNVFENNPSLIRTEKHCVDVYSVQG
QTAQAKILNNILKEDYANEAESQSVVVVLADESLLIPTLQTIPTNHNGRELELNVTMGFA
LAASGVYGLIDLWSGCQLEIQQTGRLSYKNVEAFLTHPLTGLRQAMRDKINTALLAEKEI
EVPYTRLVNQKGLFEVFFKKLLHAGEVMEQLLEVMNFVLARLSHAGNLKKIDAELFAKAI
QELNRLYDTFGKHVDHEEIPFIISLVQKAVMGLAVPLSGDPLKGIQVMGLLETRNLNFDK
VVMLGFNEGIVPKSSVGNSFIPDSIRRVYGLPVLENQDAISAYMVYRLIQRASDVSFVYN
SLTDDATSGEPSRILKQLAYESGFEFNYHTLDLNVRTEPLKEITIKKEGNEAIQQGLQRY
LNKQKTLSPSALTQYILNPIDFFFNYIAGIKEPKEISAVVEANEVGSILHKVMEYFYKDC
IRQEITLPLLKEKRKKIPALTQKAFAAVIFNNPEKQAEFKGMQKVILAIVEAYVNIIVSQ
DERQTPFMIESLEQWVEADISFPLGGRAASIRIGGIIDRVDLKDGITRIIDYKTGSDKLN
YKDIPELFNTDGKHINKALIQTLLYTYIYEQFSGKTAVEPNLYVVKTMSQEGVWFKSGRQ
SLSGSYLEEVKPEFLSALKEKLTELFEAPYFKSSIIEDNYKYSIYKTLFGK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaagccatttttacaggaggtagcagcagatctggtcgcaaggtttggcgatggctta
caacattgtgcaattatttttaacaacaaaagaccggcagcctatttacagaaacacctg
gccgacctgataaaaaagcctttttttagtccctctttttttacggttcaggagtttttt
gctaaatggaccaattacaggatagccgatttttacatacagttttttacgttgcataaa
atttataaccagctgctcaaagaagaggggatggaaagcatttcggggaataaatttttt
ccgctggcaaaaattatattggctgattttgcacagatagatatagatctggttgatgcg
gataaaatttaccgggacctggaagacatatctgtcatcaataaagatttcgattattta
agccctgaacaatatcaatatctgtcgcagttctggacttcctattctgaagggaaacac
aaaagacagcaggaactttttataaaaatgtggcgcagaatgcctaaactttatcatcag
tttcatactgcattaaaggaacagggttttgtaaccaatggcgcagtttacagggggctg
gccgaaggtaatgccggagaacaaaattttataaagggatttgataagggtaaaatcatt
tttgctggctttaatgcacttagtaacgcagaggctaaggtttttgtgaacttacagaaa
gccggcaaagcgttgttctattttgatgcagatagctattacctggatgatccgttacag
gaagccgggctgtttttacgaaaaaatatttatcagctgggaattaaaaacgtttttgaa
aataaccccagtttaatccgtaccgaaaaacactgcgttgacgtgtatagtgtacagggg
cagactgcacaagcgaagattttgaacaatattttaaaagaggactatgcaaatgaggca
gaaagccagtctgttgttgtggttttggccgatgagagcctgctgatccctactttgcaa
accataccaacaaaccataatggccgggagctggaactgaatgtcactatgggttttgca
ttggcggcttcaggtgtatatgggcttatagatctctggtcgggctgtcagctggaaatt
cagcagacggggcggttgtcctataagaatgttgaggctttcctgacccaccctttaacg
gggctgagacaagcgatgcgggataagatcaataccgcgttgctggcagaaaaggaaata
gaagtgccttatacaagattggttaatcagaaaggactttttgaggttttctttaaaaag
ctgttgcatgccggcgaagtgatggaacagttgctcgaagtgatgaattttgtactcgca
aggctgtcccatgcgggtaatttaaaaaaaatagatgctgaattatttgcaaaggccatt
caggagcttaacaggttatacgatacttttggtaagcatgttgaccatgaagaaatccca
ttcattatctcattggtgcagaaagcagttatggggctggcagtgccgctttccggcgat
cctttaaaaggtatacaggtaatgggtttactggaaacaagaaatctgaattttgacaag
gtagtgatgctgggtttcaatgaagggattgtccccaaatcctcagtcgggaatagtttt
attccggatagcatccggcgtgtttacggccttcctgtgctggaaaatcaggatgccatt
tctgcttatatggtttacaggcttattcagcgtgcatctgatgtaagttttgtttacaat
agtcttactgatgatgctacatccggtgaacccagcagaattttaaaacagctggcctac
gaaagtggatttgagtttaattaccatacgctggatttaaatgtaagaacagagcccctt
aaagaaatcacaattaaaaaagagggcaatgaagccatacaacaaggtttgcagcgatac
ctcaacaagcaaaagacgctttcgccgtcggcgctaacccagtatatcctcaatccaatc
gatttctttttcaattatatcgcaggtattaaggaacccaaggagatcagtgcggttgta
gaggccaatgaagtagggtctattttgcacaaggtgatggaatatttttacaaagattgt
atccgtcaggaaatcacattgcctttgctaaaggaaaagcgtaaaaaaattccggcactg
acacagaaagcttttgctgcagttatatttaacaatcctgaaaaacaagcagaatttaag
gggatgcagaaagtgatccttgcgattgttgaggcttatgtaaatattatcgtaagccag
gatgagcgccagaccccctttatgattgaaagccttgagcagtgggtggaggcagatatc
agtttcccgcttggaggaagggcagccagcatcaggatagggggcattatagacagggta
gatctaaaggacggtattacaaggatcatagattataaaaccgggagcgacaagctgaat
tataaagacattcctgaattgtttaatacggatgggaaacacatcaataaggcgctgatc
cagaccttgctttatacctatatttacgagcagttttctggtaaaaccgcagttgagcca
aatttatatgtggttaaaaccatgagccaggagggggtatggtttaagtcgggcaggcaa
agcctgtctggttcttacctggaagaagtgaagccagagttcttatcggccctaaaagaa
aagctgacagaattatttgaggctccctattttaaatcttccattattgaggacaattat
aaatactccatttataaaacattatttggtaagtag
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