Pseudomonas hydrolytica: NLY38_04680
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Entry
NLY38_04680 CDS
T08519
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
phf
Pseudomonas hydrolytica
Pathway
phf00470
D-Amino acid metabolism
phf00550
Peptidoglycan biosynthesis
phf01100
Metabolic pathways
phf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLY38_04680
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLY38_04680
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NLY38_04680
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phf01011
]
NLY38_04680
Enzymes [BR:
phf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NLY38_04680
Peptidoglycan biosynthesis and degradation proteins [BR:
phf01011
]
Precursor biosynthesis
Amino acid ligase
NLY38_04680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
GARS_A
ATP-grasp_5
RimK
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
UTH32619
LinkDB
All DBs
Position
1022252..1023193
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AA seq
313 aa
AA seq
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MSLHSSLDPKAFGRVAVLFGGKSAEREVSLKSGNAVLSALQAAGVDAFGIDVGDDFLPRL
ASEKIDRAFIVLHGRGGEDGSMQGLLECAGIPYTGSGILASALAMDKLRTKQVWHSLGLP
TPRHAVLTSQADCEAAAAELGFPLIVKPAHEGSSIGMAKVESVEALIAAWQDAARYDSQV
LVEQWIAGPEYTVAVLRGEVLPPIGLGTPHTFYDYDAKYLADDTQYRIPCGLSAEKEAEL
KELTARACEAVGTQGWARADVMQDASGQFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQL
VLAILADSVEARG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcacagtagcctcgatcccaaggctttcggtcgcgtcgccgtgctgttcggc
ggcaagagcgccgagcgcgaggtgtcgctgaaatccggcaatgccgtgctcagcgccctg
caggcggccggggtggacgccttcggcatcgacgtgggcgatgatttcctgccgcgcctt
gccagcgagaagatcgaccgcgccttcatcgtgctgcacggccgcggtggcgaggatggc
tccatgcagggcctgctcgagtgcgccggcattccctacaccggcagcggcatcctcgcc
tcggcgctggccatggacaagctgcgtaccaagcaggtctggcacagcctcggcctgccg
acgccgcgtcacgccgtactgacttcgcaggccgactgcgaagcggcggctgccgagctg
ggcttcccgctgatcgtcaagccggcccatgaaggctccagcatcggcatggccaaggtc
gagagcgtcgaggcgctgatcgcggcctggcaggacgccgcgcgctacgacagtcaggta
ctggtcgagcagtggatcgccggccccgagtacaccgtggccgtgctgcgtggcgaagtg
ctgccacccattggcctgggcacgccgcataccttctacgactacgacgccaagtacctg
gccgatgacacccagtaccgcattccctgcggcctctcggccgagaaggaggcggaactg
aaagagctgactgcgcgcgcctgcgaggccgtgggcacccagggctgggcgcgtgcagac
gtgatgcaggatgccagtggccagttctggctgctggaagtgaacaccgtaccgggcatg
accgatcacagcctggtgccaatggccgcgcgcgccgccggtctggacttccagcagctg
gtgctggcgatcctggccgacagcgtcgaggcgaggggttaa
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