Pseudonocardia sp. HH130630-07: AFB00_20670
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Entry
AFB00_20670 CDS
T04486
Symbol
ligC
Name
(GenBank) ATP-dependent DNA ligase
Organism
phh
Pseudonocardia sp. HH130630-07
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DUF3509
Motif
Other DBs
NCBI-ProteinID:
ANY08285
UniProt:
A0A1B1ZRF1
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Position
complement(4353137..4354207)
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AA seq
356 aa
AA seq
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MDLPVMPPVKPMLAKPAPAIPDDRLYEPKWDGFRAIVFRDGDEVEIGSRNERPMTRYFPE
VVEAVRAHLPERSVVDGEIVVADRAQNRLDFEALQQRIHPAASRVTLLSTETPASFVAFD
LLALDDDDLTARPFAQRRELLESALADAGDPVHVTPITGDPAVARRWFERFEGAGLDGLI
AKDPAGTYQPDKRVLTKIKHERTADCVLAGYRVHKSGPDAVGSLLLGLHDERGVLVSVGV
VGAFPMARRRELMTELAPLVTDFDDHPWAWAKQLEGERTPRKSETSRWNAGKDLSFVPLR
PERVVEVRYDYMEGARFRHTTQFVRWRPDRTPESCTYAQLERPVSFDLGEVLAGRG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtggacctgcccgtgatgcccccggtgaaaccgatgctggccaagccggcacccgcgatc
cccgacgaccggctctacgaacccaagtgggacggcttccgggcgatcgtgttccgcgac
ggcgacgaggtcgagatcggctcccgcaacgagcggccgatgacccgctacttccccgag
gtcgtcgaggcggtccgcgcccaccttccggagcggtcggtcgtcgacggcgagatcgtc
gtcgcggaccgggcgcagaaccggctcgacttcgaggcgctgcagcagcggatccatccc
gccgccagccgggtgacgctgctgtcgaccgagaccccggcctcgttcgtggcgttcgac
ctgctcgccctcgacgacgacgacctgaccgcgcgcccgttcgcgcagcgccgggagctg
ctggagtccgcgctcgccgacgcgggcgacccggtgcacgtcaccccgatcaccggcgac
ccggcggtggcccgccggtggttcgagcggttcgagggcgccggcctggacggcctcatc
gcgaaggacccggccgggacctaccagccggacaagcgcgtcctgaccaagatcaagcac
gagcgcaccgcggactgcgtgctcgccggctaccgggtgcacaagtccgggccggatgcc
gtcggctcgctgctgctcggcctgcacgacgagcgcggggtgctggtctcggtcggcgtg
gtcggggcgttcccgatggcgcgccgtcgcgagctcatgacggagctggccccgctggtc
accgacttcgacgaccacccgtgggcctgggcgaagcagctcgagggcgagcgcaccccg
cgcaagtccgagaccagccgctggaacgccggcaaggacctgtcgttcgtcccgctgcgc
ccggagcgggtcgtggaggtgcgctacgactacatggagggcgcccggttccggcacacc
acccagttcgtgcgctggcgcccggaccgcacccccgagtcgtgcacctacgcccagctg
gaacgcccggtgagcttcgacctgggcgaggtgctcgcgggccgcggctga
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